SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A171K409 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A171K409
Domain Number 1 Region: 233-518
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 6.8e-76
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0000000421
Further Details:      
 
Domain Number 2 Region: 25-179
Classification Level Classification E-value
Superfamily Aspartate receptor, ligand-binding domain 3.53e-26
Family Aspartate receptor, ligand-binding domain 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A171K409
Sequence length 606
Comment (tr|A0A171K409|A0A171K409_BORPT) Putative methyl-accepting chemotaxis protein II {ECO:0000313|EMBL:KCV47187.1} OX=1331248 OS=Bordetella pertussis 2356847. GN=AZ26_1886 OC=Alcaligenaceae; Bordetella.
Sequence
MWSNLKVRTCITLVLGLFLVAMLVSNGMAWLGMSSSNDKLERVNNAYSNQAVPAYDAYVM
LLRARLNIVSSMMDLQEGRLKESADTLAHAQRQAGEARERFEAFLAVAKASSGADRVGAV
ETAFHAYLEVAARQMEAMQNQRLGEFVQLNPSAQRLNTAFDTAASAYLDRIDTDTDALVD
DARAEHLRANTVTLVLIVLALALCAGCGVFIGRAVLRPLKEAGQHFDRIAAGDLTARVDV
RNSNEIGQLFAGLKRMEESLTRTVAAVRRGVDEINVGSREISAGNTDLSSHTEEQAASLE
ETAASMEQLASTVKQNADNARQANQLAGVASDVAERGGSAVSEVVTTMQDISASSRKISE
IVSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSAQAAKEIKVLIED
SVGKVGTGSQQVERAGATMQEIVASVKRVTDIMGEISAASEEQSSGIEQVNRAVSQMDEA
TQQNAALVEEAAAAAGSLQEQAQRLAEAVSVFRINAGEVIDVSARQLAQQRQAPRVAAAP
ASAAAPEAPPEPAPRLARPAARADVAAEAASVRRPARRPAATEPAARTTAAPSRRRPPAD
NDWESF
Download sequence
Identical sequences A0A171K409

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]