SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A177B7K8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A177B7K8
Domain Number 1 Region: 620-714,796-860
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.31e-17
Family Canonical RBD 0.01
Further Details:      
 
Domain Number 2 Region: 562-619
Classification Level Classification E-value
Superfamily DEK C-terminal domain 0.000000000772
Family DEK C-terminal domain 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A177B7K8
Sequence length 897
Comment (tr|A0A177B7K8|A0A177B7K8_9METZ) Heart and RRM expressed sequence {ECO:0000313|EMBL:OAF70278.1} KW=Complete proteome; Reference proteome OX=1819745 OS=Intoshia linei. GN=A3Q56_01944 OC=Eukaryota; Metazoa; Mesozoa; Orthonectida; Rhopaluridae; Intoshia.
Sequence
MSHHISHKIFSSPIKNIETSELSPFTKLNKFTRQKDMTQEIDNDTNFSGHALQSETNSNL
DEECRMNIEKAGDEISKEIEDMKSKIPKNGSSLVEYREEDTVDPRHLSTTCSVSTTCATK
GSIEHDSVIQDDYMNKDGDMEDFNKAKESPDDLIDNEEIKDSQQFEIKGCVFTNQKVEFE
PLNEERSVDDQIEADKTLQSEDVSESEKMETEQDEDVSEKINENACTNNVTENATTNNKD
ENQNTSTNNEVNEDSSPKKENEDSDDNSNYQTEDDKIQAKTSVPMEIDELSNDDVESTDN
EVTAADVKKTTKLVNKKKPVAKRKGKEKKTVSFVEVESSEDVSVSVPLFDQPLILESKVK
RSRRSAEMYVNTSVVNKSENTKTDTIIATGKGIKLSSISKVKDAIKNASYADVSALHCIL
FSHRCKLPETRSNLLSFNGLDQDNADKCMTILNGLSCSKKIKTFAQILDINLMKLKKADI
VDNVYNFLLKPRKSDSTRSTRSRVNRKSSVESDESEEEVVESEEEVVEKSQRKKRGRKPK
KVSTPPPKKRKVEASSSEVKSKNYKNPTMKNLKASIQNIIKTTDLNKTTMKTVYGMIEKE
YPGIDINDSKGVIKKLVNQVRTLFVSGLPMDTRPRELYLLFRSYPGYEYALLKAHSTKQD
RVVSPVAFIKFKNRQFAVKAKTDLANFLFDPNLNQVIRLEFARSNTKSSSGSKMFAYMSN
SDAKSLSNSVMQKSNSVYGYNCNAVMNMYGGNFPFTYPQMATNNGYPPFPVPTSYLYPSI
YSSMDMAQISLNNNEVESSILFVSNISLFTTGPELVEIFSTFAEFEKIRITCFNFMSVAF
AYFISLNEASEALEGLQGYVPFTSDRGGIVIHYANPKMIDIMEMSNNYIQFNKNSID
Download sequence
Identical sequences A0A177B7K8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]