SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A178FDV6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A178FDV6
Domain Number 1 Region: 461-649
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 3.57e-47
Family DNA polymerase beta-like 0.00011
Further Details:      
 
Domain Number 2 Region: 306-400
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 6.28e-23
Family DNA polymerase beta, N-terminal domain-like 0.001
Further Details:      
 
Domain Number 3 Region: 405-459
Classification Level Classification E-value
Superfamily PsbU/PolX domain-like 6.28e-16
Family DNA polymerase beta-like, second domain 0.0025
Further Details:      
 
Domain Number 4 Region: 93-187
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000157
Family DNA topoisomerase II binding protein 1, TopBP1 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A178FDV6
Sequence length 651
Comment (tr|A0A178FDV6|A0A178FDV6_TRIVO) Uncharacterized protein {ECO:0000313|EMBL:OAL70358.1} OX=34388 OS=Trichophyton violaceum. GN=A7D00_5324 OC=Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.
Sequence
MDKETFCGELYASNKEDQDDDCVLSTLRNRRRREVSNRTKDPNAISEKALPREASERETV
GIPDHDRSIKPNKKPKLARDGMRKKIKESINSVNDHPSVLNGLVLYFIPNDDISQARRIR
ISRVLEFGATRATKFDSSVTHIVAERRLNYEDVVEYLQVSSVPVNIILVNENYPSECIMN
RRILDASSPRFQIKRKLLPEPQVIPSGEPRHDCIPTNSSRGTDSKKAGTKSTEEAVPVPP
GHLPHFPAKDTADQDGMQASDPDHLDLAIRHIKNIAALPLDSSDEEDDEIVPGEFQSGLT
TDCPAWQKSFTCMNKMDGKDRADNPNSRTIDVLQQMLSYYERTADQWRCLAYRRAIAALR
RERNKVVSKSQALKIKGIGERLAAKIEEIVWTNRLRRLEQANMEPRDALLSQFLNIYGVG
YQQASKWVAQGYKSLDDLKNRANLTTNQKIGIERYDDFQKRIPREEVEAHCAIVREAVLA
MDSSYTVIIGGSYRRGGADSGDIDLIITKEGVSLQEIHDQIMTVVVPQLFERRFLKTGLA
VSSRIDGSKWHGASALPGNPVWRRIDLLFVPGDELGAALIYFTGNDIFNRSLRLLASKKG
MCLNQRGLFSDIMRGPGRVKLNAGHLLESRDEKRIFELLAVPWRPPEHRVC
Download sequence
Identical sequences A0A178FDV6

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]