SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A178WWK5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A178WWK5
Domain Number 1 Region: 22-260
Classification Level Classification E-value
Superfamily PLP-binding barrel 9.45e-67
Family Alanine racemase-like, N-terminal domain 0.0000352
Further Details:      
 
Domain Number 2 Region: 385-497
Classification Level Classification E-value
Superfamily S-adenosylmethionine decarboxylase 2.94e-30
Family Bacterial S-adenosylmethionine decarboxylase 0.00054
Further Details:      
 
Domain Number 3 Region: 234-375
Classification Level Classification E-value
Superfamily Alanine racemase C-terminal domain-like 9.42e-30
Family Eukaryotic ODC-like 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A178WWK5
Sequence length 499
Comment (tr|A0A178WWK5|A0A178WWK5_9PSEU) S-adenosylmethionine decarboxylase beta chain {ECO:0000256|HAMAP-Rule:MF_00464} KW=Complete proteome OX=1825094 OS=Amycolatopsis sp. M39. GN=A4R44_07685 OC=Amycolatopsis.
Sequence
MLERCRAFLEERQPPTPCLVVDLDVVRGNCERLRQVLPEARMYYAVKANPAPEVVRVLRQ
AGAGFDVAGREEIELCLAQGVRPELLSYGNTVKKARDIEFAHRVGVRRFTFDSLAELEKI
AEFAPGATVSCRILVDSPGSRTPFGRKFGCDVEMAVDLVVRAAELGLDPEGVAFHVGSQH
VDPRAWEAGVAAAGEVTRAVAERGVCLRGLNIGGGFPVGYLTEPPPLAEYAAVIREAVGR
HFAVTPELSFEPGRAVVASAGVIRSEVVLVSRKSAADEKRWVYLDIGRYGGLAETENEAI
AYRLVTAHDGGPDGPVVVAGPTCDGDDVLYQRTPYRLPLALRAGDYVDIPDAGAYTQSYS
SVSFNGFPPLRSYFTGGEPGGVGEFAGRHVLAEFSGVSAELLDDPVFLCESLERVLDKAG
AAVCELTCKQFEPHGVTAMALLAESHASIHTYPERGSAFVDVFTCGRKADPELAVQLLRD
LLGASVSRVTTIHRGQEDS
Download sequence
Identical sequences A0A178WWK5 A0A1I5NIU6

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]