SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1A8APD4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1A8APD4
Domain Number 1 Region: 419-558,675-833
Classification Level Classification E-value
Superfamily Substrate-binding domain of HMG-CoA reductase 4.97e-107
Family Substrate-binding domain of HMG-CoA reductase 0.00000000389
Further Details:      
 
Domain Number 2 Region: 561-677
Classification Level Classification E-value
Superfamily NAD-binding domain of HMG-CoA reductase 1.23e-42
Family NAD-binding domain of HMG-CoA reductase 0.00000318
Further Details:      
 
Domain Number 3 Region: 51-218
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 0.0000732
Family Multidrug efflux transporter AcrB transmembrane domain 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1A8APD4
Sequence length 860
Comment (tr|A0A1A8APD4|A0A1A8APD4_NOTFU) 3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219} OX=105023 OS=Nothobranchius furzeri (Turquoise killifish). GN=HMGCRB OC=Nothobranchius.
Sequence
MLVQLFRFHGLLVASHPWEVIVGTLAVTICLMSMNTLATSNQMCSWNNCPKVEEEVLTSD
VIILTVTRCMAIIYIYFQFKNLLQLGSKYILGIAGLFTVFSSFVFSSVVIHFFGKELTGL
NEALPFFLLLIDLSKACTLAKFALSSNSQEEVRENISQGMAILGPTFTLDALVECLVIGV
GTMSGVPQLEIMCCFGCMSVLANYFVFMTFFPACVSLVLELSRESREGRPIWQLSHLAHV
LAEEEDNKPNPVTQRVKIIMSLGLALVHAHTRLTAESSGGNHTAEGPMAKRMDSTGTMWP
VKLSSLELEHVITLSLALLLAVKYVLFEQAEAESSLSLRSPINVSSVKQKSRAAEDCCRR
DVSAAKPQRTAGSVLTTGAASDHKLVPEGETTITAATETLTVENDTCFSPSCKSEPRSME
ECLAILSDPQRGPRMLSDAEVMILVTSSKILNYKLEAVLETPERGVGIRREMLSAKLPGT
SALACLPYKGYDYSKVMGTCCENVIGYMPVPVGVAGPLLLDNKQFYVPLATTEGCLVAST
NRGCRALSLSGGCSSRILADRMTRGPVVRLPSACRAAEVKLWLETSEGFSLLKDAFDETS
RFARLEKLLVCVAGRNLFIRFQSQTGDAMGMNMLSKGTEKALQQLQQQHPDVEVLSLSGN
FCTDKKSAAVNWILGRGKSAVCEATIPGRVVREVLKSSTAALVDLNISKNLVGSAMAGSV
GGFNAHAANVVAAIYIACGQDPAQTVGSSSCITQMEATGPNREDLYISVTMPSIELGTVG
GGTNLPPQQACLQMLGVTMPNQPGENARQLARVVCATVLAGELSLMAALAAGHLVKSHMT
HNRSKTNLPEMAVSDSQATA
Download sequence
Identical sequences A0A1A8APD4
XP_015798591.1.37898

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]