SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1C4I303 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1C4I303
Domain Number 1 Region: 143-330
Classification Level Classification E-value
Superfamily Ribonuclease H-like 8.73e-17
Family Retroviral integrase, catalytic domain 0.025
Further Details:      
 
Domain Number 2 Region: 344-407
Classification Level Classification E-value
Superfamily mu transposase, C-terminal domain 0.0000902
Family mu transposase, C-terminal domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1C4I303
Sequence length 515
Comment (tr|A0A1C4I303|A0A1C4I303_9ACTN) Putative transposase {ECO:0000313|EMBL:SCD31313.1} KW=Complete proteome OX=1758151 OS=Streptomyces sp. ScaeMP-e83. GN=GA0115243_100835 OC=Streptomyces.
Sequence
MPPAPDLNSLRAAAIHRLYTLEQAEQLTRARIIGVADAFGVDPRTVDRWLAGARANNGTY
QPPGRTSFTLTPHMLDAIARWRGNATAAWKELRAENHPVPSLPTFHRATNRALTPGMRAG
LRGGEKARRRFDVAGERDRHHRNYAWETDHVEASVKVRVEGHIRKPWITFFIDCATSAIC
GLAITPQRPSREAVLVAIRDAVLIDEHHGPFGGIPTYLRVDGGKEFLCATVTEALGALGT
EIIELPPFTPEGKPNVEAVNGAIKKTLFAGMPGYTHAPTLRGGKPVDSDQPLLPFEEFVR
MVLEWVQRWNHENTLRGLNGQTPREAWDADPTLIDTVTTEALHTYTLERHGRPLTISNGG
VRWRKRNYIADWMHGRVGEKVHLRYLPHHDHRVELYDPQTGRHLGHAVMAQQATPEQGLS
LKRARARQADRLRTQLKKAERNRNTRYAAVTRPAPPTPLDAMPEEEALEHLRNLDGFDPA
AEALPDLIQLPEPDAGLTLPINPSPPPPTDPKDQP
Download sequence
Identical sequences A0A1C4I303
WP_093686024.1.21270

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]