SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1D3Q1U5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  A0A1D3Q1U5
Domain Number - Region: 14-80
Classification Level Classification E-value
Superfamily PWI domain 0.000445
Family PWI domain 0.005
Further Details:      
 
Domain Number - Region: 541-565
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0262
Family CCCH zinc finger 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A1D3Q1U5
Sequence length 765
Comment (tr|A0A1D3Q1U5|A0A1D3Q1U5_PLABE) Nuclear polyadenylated RNA-binding protein NAB2, putative {ECO:0000313|EMBL:SCN26810.1} KW=Complete proteome OX=5821 OS=Plasmodium berghei. GN=PBNK65E_000279900 OC=Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).
Sequence
MISNNTETDKKYQNIITEKLRELLGEYEVDILTEYVWHMAGNSKSGSEFMCNELKDFLGD
HTTVFVDWLLKLIDEIKKNQKDDNLNDDKSRSNKSHDSRSKHSLTQSKKSKSYLKDYDSN
KRNISRSRKGSKSIRSSSDKYSNNDPDPFSKKYKKRQREISIRSNSSRIHSRKFHYDRNQ
SRRRLNDNEKYDKKLKLREKGRINDRSYSRSLSPNRKIYVEKKGGVKKGNKEYSYSDELC
SNNEMEQRKNSVSDEYNNLDKKNKAILKPNPRFGDDKTFPFLQPASSNLNPQEMPNYVMN
RNYPYDKGMNFEGKYYQGNYMVSQPNILDGNVNNPTNSYMANNVNNNYFNPPNPNHYINN
MQQKNMIPQPGFVHTNKFPNNMNSSNYSYPKNNIMNINAKNNNTLNFGNPNNNMYLNNQK
NQEQFHTQKFNKQIHFNKSYANSDKSPIKPHNAHTTQPMISNVWINQNANNMTNNNDKNN
IANSQINDQLPNTQNLNLQDETKLNHVNDGGTNVAIAGGNQMVNQDGIVDPANTMVKIPK
KCLYLPNCQFGDKCRYIHPVENCRNWPYCAFGSECIYIHPNVPCKFGAYCANYYCNYSHD
HIDTSNMPEIGTNGYFLNKKLINNTTQNTNNESFDNKVAQISISMPKTPPEMKKDKNKSE
YNENEYIQGMLEAEKQELNNLENNNSINNNILGLQLGECTEGDGNPNNNLINLSQTNIPF
SINKNNLGNLSENNVSNYNCFNGVSNSDKFNQNNLPTGQEASEHK
Download sequence
Identical sequences A0A077XD75 A0A1D3Q1U5
PBANKA_112200

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]