SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1M4NIP3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1M4NIP3
Domain Number 1 Region: 419-542
Classification Level Classification E-value
Superfamily Cell wall binding repeat 2.83e-52
Family Cell wall binding repeat 0.0000201
Further Details:      
 
Domain Number 2 Region: 206-325
Classification Level Classification E-value
Superfamily PspA lactotransferrin-binding region 2.75e-34
Family PspA lactotransferrin-binding region 0.00000226
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A1M4NIP3
Sequence length 542
Comment (tr|A0A1M4NIP3|A0A1M4NIP3_STREE) Pneumococcal surface protein A {ECO:0000313|EMBL:SHD60847.1} OX=1313 OS=Streptococcus pneumoniae. GN=pspA OC=Streptococcus.
Sequence
MNKKKMILTSLASVAILGAGFVASQPTFVRAEESPVASQSKAEKDYDAAVKNAKNAKKAV
EDAQKALDDAKAAQKKYDEDQKKTEEKAKEVKKASEEEQAANLKYQQELVKYIKYTRENN
STKRTEAEKVMTAAKKEHEKKQTELAKVLAKVIPSAEELENTRQKAEKAKEKEPELTKKL
EEAKAKSEEAEKKATEAKQKVDAEHAKEVAPQAKIAELENQVHRLEQDLKDINESDSEDY
VKEGLRAPLQSELDTKKAKLLKLEELSGKIEELDAEIAELEVQLKDAEGNNNVEAYFKEG
LEKTTAEKKAELEKAEADLKKAVDEPETPAPAPAPAPAPAPAPAPAPKPAPAPAPAPAPA
PAPAPAPTPEAPAPAPAPKPAPAPKPAPAPAPAPAPAPAPKPEKPAEKPAPAPKPETPKT
GWKQENGMWYFYNTDGSMATGWLQNNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMAT
GWLQYNGSWYYLNASGAMATGWAKVNGLWYYLNSNGAMATGWAKVNGSWYYLNANGAMAT
GW
Download sequence
Identical sequences A0A1M4NIP3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]