SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1M6QEU6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1M6QEU6
Domain Number 1 Region: 987-1098
Classification Level Classification E-value
Superfamily Collagen-binding domain 6.15e-30
Family Collagen-binding domain 0.0000504
Further Details:      
 
Domain Number 2 Region: 867-975
Classification Level Classification E-value
Superfamily Collagen-binding domain 5.62e-24
Family Collagen-binding domain 0.00058
Further Details:      
 
Domain Number 3 Region: 773-855
Classification Level Classification E-value
Superfamily PKD domain 5.23e-18
Family PKD domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1M6QEU6
Sequence length 1102
Comment (tr|A0A1M6QEU6|A0A1M6QEU6_9CLOT) Microbial collagenase {ECO:0000313|EMBL:SHK18834.1} KW=Complete proteome; Reference proteome OX=1121302 OS=Clostridium cavendishii DSM 21758. GN=SAMN02745163_03384 OC=Clostridium.
Sequence
MKNKKIAKILLITLFTTLTINEYAFSLDNNQRESVNTKDTKISQKHIKNGKINENTDSVK
HVRNKNEINDTKPNIDRQLKSKPVSIRKADQKYTMDDLQKMSYRELGNILLEIKWNDITD
LFQYSEGARAFYSDEKRMDYIINLLKERGHKFTKDDTAGIPTIIEVLRSGFYLGFYNDGL
KELNKRAYQDKCIPAILEIQKNPNFALGTSAQDEIVAAVGILVSNASSNAEVVNNFMPVL
TDFKNNFVALNKDRGKQKAIYNIIDGVKYDIEKYAFEKQGDYSNSIWSGKIDKFIDFISD
FALKGDVDSENEWIINGCLYYIDTCGKVYSKPQEGLRVLTEGMKRYPYLGEQYLQCASSI
GYSYGSKDYYGKSINVTQIKEEGLNKYLPKQYKFDDGKVVVKTGDKVTEEKVKRLYWASK
EVQAQFFRAIGTDKPLEQGNKDDILTIVIYNSPKEYEMNRLLKGLDVKNGGIYIEGDGTF
YTYERKPEESIYTLEELFRHEFTHYLQGRYLVPGLWGSSKLYQNDRLTWLEEGGAELFAG
STRTNDVLPRKSVVSNIVNTEADQRYSVDKTMHSKYGSFEFYHYGFMVQDYMYEKDIAKL
NELYESIKNNNVDKYDSLISKYSNDAALENNYRSYMDSLVNKYDSLTTPLVSDDYIKVHK
TKANQEIFDDITRVAQIQNVKTEINKSPFFNLFSVRGTYNGGKSQGKFNDIRNIDKKLNE
TLNTLNDYEWSGYKTVTAYMVNYNVDSNNNVTWELVFNGISNENIQNNDTVSPIVNIKSE
QKVKVNEKTSFNSEVTLDTGKKVVEYNWDFGDGLSSNEKNPQHSYSKIGNYKVTLTVKDD
AGLSGSNSVYITAEDIIKPTDPVLDSEVEPNDTFETANGPLKNKTAINGTIKDSESDMFY
FDLPADGAVDINLINKGNNGIAWLLYNSSDNSNYIAYPSERANNSIKGTAKLTKGRYYVV
AYGYGRGASNYSLEVKWNGSPETPKIKEYNEKEYNDSFENANSITVNNSLVKGSLSQTDR
RDSYEFEITKEGNLDIDLTKGSNDLGVAWNLYSENDLTKYMSYGHRDGNKITNKVHLKPG
KYYLVVYSYEGTGNYTVQSKFN
Download sequence
Identical sequences A0A1M6QEU6
WP_072990584.1.40184

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]