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Domain assignment for A0A1P8SSH6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1P8SSH6
Domain Number 1 Region: 2780-3083
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.26e-120
Family Viral cysteine protease of trypsin fold 0.00000055
Further Details:      
 
Domain Number 2 Region: 5991-6169
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 2.74e-63
Family Nsp15 N-terminal domain-like 0.0000417
Further Details:      
 
Domain Number 3 Region: 3505-3663
Classification Level Classification E-value
Superfamily Coronavirus NSP8-like 8.24e-59
Family Coronavirus NSP8-like 0.0000187
Further Details:      
 
Domain Number 4 Region: 3796-3916
Classification Level Classification E-value
Superfamily Coronavirus NSP10-like 2.35e-50
Family Coronavirus NSP10-like 0.00000778
Further Details:      
 
Domain Number 5 Region: 6169-6322
Classification Level Classification E-value
Superfamily EndoU-like 3.73e-50
Family Nsp15 C-terminal domain-like 0.0000986
Further Details:      
 
Domain Number 6 Region: 4343-4646,4687-4832
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 4.4e-48
Family RNA-dependent RNA-polymerase 0.019
Further Details:      
 
Domain Number 7 Region: 3676-3784
Classification Level Classification E-value
Superfamily Replicase NSP9 1.83e-40
Family Replicase NSP9 0.00021
Further Details:      
 
Domain Number 8 Region: 3381-3463
Classification Level Classification E-value
Superfamily Coronavirus NSP7-like 6.41e-30
Family Coronavirus NSP7-like 0.00031
Further Details:      
 
Domain Number 9 Region: 5145-5456
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.36e-29
Family Tandem AAA-ATPase domain 0.036
Further Details:      
 
Domain Number 10 Region: 1006-1177
Classification Level Classification E-value
Superfamily Macro domain-like 9.59e-29
Family Macro domain 0.00032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1P8SSH6
Sequence length 6630
Comment (tr|A0A1P8SSH6|A0A1P8SSH6_9GAMC) ORF1ab {ECO:0000313|EMBL:APY26718.1} OX=11120 OS=Infectious bronchitis virus. GN=1ab OC=Nidovirales; Coronaviridae; Coronavirinae; Gammacoronavirus.
Sequence
MASSLKQGASSQNQRSVILVAKDIPDQLCDALFFYTSHNPKDYADAFAFRQKFDRSLGAG
KQFKFETVCGPFFLKGVDKITPGVPAKVIKATSKLADLEDIFGVSPLARKYRELLKTACQ
WSLTVEALDARAQTLEEIFEPTEIFWLQVAAKIQVSAMAMRRLVGEVTAKVMDSLGSNLS
ALFQVVKETMARIFQKALAIFESVSELPQRIAALKMAFAKCARSITVVVVEHALTIREFA
GTCLASINGAVAKFFEELPTGFMGAKVFSTLAFFKEAAVKIVENIPNAPRGTKGFEVVGN
AKGTQVVVRGMRNDLTLLDQKAEVPVEPEGWSAILEGHLCYVFKSGDRFYAAPLSGNFAL
HDVHCCERVVCLSDGVTPEINDGLVLAAIYSSFSVSELVAALKKGEPFKFLGHKFVYAKE
AAVSFTLAKAATIGDVLKLFQSARVKTEDVWSALTEQSFEFWKLAYNRVRNLEEVLKTHF
CKAQVSIVVLAVVLGEGIWHLISQAIYKLGGLFSKVVDFCAKYWEGFCEQLKKAKLLVTE
HLCVLKGVAQHCFQLLLDAIHSMYKSFQKCALGRIHGDLLFWKGGVHKIIQDGDEIWFDA
IDSTDVEDLGVIRERPVEFEVCDGITLPENQPGHMVQFEDDGKNYMFFRFKHEDNVYYTP
MSQLGAINVVCKAGGKTVTFGETTVKEIPPPDVVSIKVSIECCGEPWNTIFKKAYKEPIE
VETDLTVEQLLTVIYEKMCDDLKLFPEAPEPPPFENVALVDKNGKDLDCIKSCHLIYRDY
ESDGDIEEEDAEECDTDSADAEDDTASECEEEDEDTKVLSLLQDPASNKYPLPLDDDYSV
YNGCIVHRDALDVVNLPSGEETFVVNNCFEGAVKPLPRKVVDVLGDWGEAVDAQEQLCEQ
ESEFVKESVEKPTGVCGSAIEEAVVVEQEVVPVVEVSQEVVVFTPADLEVAKETSEDVDE
FVLVADVPIEKIVPQEKAEPQVEQEPIQVVKPQREKKAKKFKVRQTTCEKPKFLEYTTCV
GDLTVVIAKALDEFKEFCVVNAANEHMSHGGGVAKAIADFCGPDFVEYCEDYVKKHGPQQ
RLVTPSYVKGIQCVNNVVGPRHGDKDLEEKLVAAYKNVLVDGVVNYVVPVLSSGIFGVDF
KTSIDAMRKAFEGLNIRVLLFSLSQEYIDYFDATCKQKKIYLTEDGVKYRSVVVKPGDSL
GQFGQVFAKNKRVFTADDVEDEEVLFTPTTDKAVLEYYGLDAQKYVIYLQTLAQKWEVQY
RDDFILLKWRDGNCWISSAIVLLQAAKIRFRGFLAEAWAKFLGGDPTDFVAWCYASCNAK
VGDFSDCNWLLANLAEHFDADYTNALLKKRVSCNCGVKSYEFRGLEACIQPVRAPNLLHF
KTQYSNCPTCGANSTDEVVEASLPYLLLFATDGPAAVDCDENAAGNVVFIGSTNSGHCYT
QAAGKAFDNLAQDRKFGKRSPYITAMYTRFSLKNENSLSIAKASKSKSKLVKEDDSNLAT
SSKFSFDDLTDFEQWYDSNIYESLKVQETPENMDEYVSFTTKEDSKLPLTLKVRGVKSVV
DFKSKDGFTYKLIPDTDENSKAPVYYPTLDSISLKAIWVEGSANVIVGHPNYNSRALRIP
TFWECAETFVKIGEKVDGVTMGLWRAEHLNKPNLERIFNIVKKTVVGTSVVTTECGKLLS
KAATFIADKAGDGVVRNVTDRIKGCFGSTREHFEKRMSPQFLKTLFFFFFCLLKASAKSL
VSSYKRVLCKVVFTALFILWFVYTSNPVIFTGLRVLDFLFEGSVCSPYADYGKESFDILR
YCGSDFTCRVCLHGKDSLHLYKHAYSVEQFYKDAVNGISFTWNWLYMLFLLLFVKPVAGF
VIICYCIRYMVLSTTVLQTGVGFLDWFIQTVFANFNFMGAGFYFWLFYKVYVQVHHIMYC
KDITCEVCKRVARSNRHEVSVVVNGRKQLVHVYTNSGYNFCKRHNWYCRNCDKYGHQNTF
MSPEVAGELSEKLKRHVKPTAFAYHVVDDACLVDDFVNLKYNAATPGKEGVHSAVKCFSV
SDFLKKAVFLKDAQKCEQISNDSFIVCNTHSAHALEEAKNAAIYYAQCLCKPILILDQAL
YEQLIVEPVSKSVVDKVCNILSNIISVDSAALNYKAGTLRDALLSVTKDEEAVDMAIFCH
NNDVEYTNDGFTNVVPSYGIDTDKLTPRDRGFLINADAAIANLKVKNSPPVVWKYSDLIK
LSDSCLKYLISATVKSGGRFFITRSGAKQVIACYTQKLLVEKKAGGVVSSTVSWFKSCCK
WLLVFYLLFTVCCLGYYQWEMSREFAPPMYDFNATMHVEGFKVIDKGVLRDIVPEDTCFS
NKYVNFDSFWGKPYVNSRDCPIVTAIIDGAGTVAAGVPGFVQWVMDGVMFIHMTQTERRP
WYIPTWFNREIVGYTHDSIITEGEFYTSIALFAARCLYLTSSNTPQLYCFNGDNDAPGAL
SFASILPHRAYFQPNGVRLIVPQQIMHTPYIVKLVSDSYCRGSVCEVTKPGYCVSMNSQW
VLFNDEYTVKPRVFCGSTVRELLFNMVSTFFTGVNPNIYMQLAIMFLILVAVVLVFAMVI
KFQGVFKAYATTVFTIMLVWLINAFVLCVHSYNSVLAIILLVIYCYASLVTSRNTAIIMH
CWLVFTFGLIVPSWIACVYLGFVLYMYTPLFLWCYGTTKNCRKLYEGNEFVGNYDLAAKS
TFVIRGPEFVKLTNEIGDKFDAYLSAYARLKYYSGTGSEQDYLQACRAWLAYALDQFRSS
GVEVVYTPPRYSIGVSRLQAGFKKLVSPSSAVEKCIVSVSYRGNNLNGLWLGDSIYCPRH
VLGKFSGDQWGDVLNLANNHEFEVVTGNGVTLSVVSRRLKGAVLILQTAIVNAETPKYKF
MKANCGDSFTIACSYGGTVIGLYPVTMRSNGTIRASFLAGACGSVGFNIEKGVVNFYYMH
HLELPNALHTGTDLMGEFYGGYIDEEVAQKVQPDKLVTNNILAWLYAAIISVKESSFSTP
KWLESTTVSIEDYNKWAVDNGFTSFVSCTAITKLSAITGVDVCKLLRTIMVKSTQWGSDP
ILGQYNFEDEMTPESVFNQVGGVRLQSSVVKKAASWFWSRCVLACFLFVLCSIVLFTALP
YRYYLHGAAVLFAAVFFISFTVKHVMAFMDTFLLPTLITVIIGVCAEVPFIYNTLISQIV
IFFSQWYDPVVFDTVVPWMFLPLVLYTAFKCIQGCYSVNSFNTSLLVLYQFMKLGFVIYT
SSNTLTAYSEGNWELFFELVHTTVLANVSSNSLIGLIVFKFAKWMLYYCNASYLNNYVLM
AVIVNGIGWVFTCYFGFYWWINKVFGLTLGKYSFKVSVDQYRYMCLHKINPPKTVWEVFS
TNILIQGIGGDRVLPIATVQSKLSDVKCTTVVLMQLLTKLNVEANSKMHAYLVELHNKIL
ASDDVNECMDNLLGMLVTLFCVDSTIDLSEYCDDILKRSTVLQSVTQEFSHIPSYAEYER
AKDLYEKVLAESKNGSVTQQELAAYRKAANIAKSIFDRDLAVQKKLDSMAERAMTTMYKE
ARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVVP
DPETWIKCVEGMHVTYSTVVWNIDNVIDADGTELQPISTGNGLIYCISGDNIAWPLKVNL
TRNVHNKVDAVLQNNELMPHGVKTKACVAGVDQAHCSVESKCYYTNISGNSVVAAITSSN
PNLKVASFLNEAGNQIYVDLDPPCKFGMKVGDKVEVVYLYFIKNTRSIVRGMVLGAISNV
VVLQSKGYETEEVDAVGILSLCSFAVDPADTYIKYVAAGNQPLGNCVKMLTVHNGSGFAI
TFKPSPTPDQDSYGGASVCLYCRAHIAHPGSAGNLDGRCQFKGSFVQIPTTEKDPVGFCL
RNKVCTVCQCWIGHGCQCDSLRQPKSSVQSDAGVPGFDKNYLNRVRGSSEARLIPLANGC
EPDVVERAFDVCNKESAGMFKNLKRNCARFQEVCGTEDGNLEYRDSYFVVKQTTPSNYEH
EKACYEDLKSEVTADHDFFVFNKNIYNISRQRLTKYTMMDFCYALRHFDPKDCEVLKEIL
VTYGCIEDYHPKWFEENKDWYDPIENPKYYAMLAKMGPIVRRALLNAVEFGNLMVEKGYV
GVVTLDNQDLNGKFYDFGDFQKTAPGAGVPVFDTNYSYMMPIIAMTDALAPERYFEYDVH
KGYKSYDLLKYDYTEEKQALFQKYFKYWDQEYHPNCRDCVDDRCLIHCANFNVLFSTLIP
QTSFGNLCRKVFVDGVPFIATCGYHSKELGVIMNQDNTMSFSKMGLSQLMKFVGDPALLV
GTSNNLVDLRTSCFSVCALASGITHQTVKPGHFNKDFYDFAEKAGMFKEGSSILLKHFFY
PQTGNAAINDYDYYRYNRPTMFDIRQLLFCLEVTSKYFECYEGGCIPASQVVVTNLDKSA
GFPFNKFGKARLYYEMSLEEQDQLFESTKKNVLPTITQMNLKYAISAKNRARTVAGVSIL
STMTNRQFHQKVLKSIVNTRNAPVVIGTTKFYGGWDNMLRNLVQGVEDPMLMGWDYPKCD
RAMPNLLRIAASLVLARKHTNCCTWSERIYRLYNECAQVLSETVLATGGIYVKPGGTSSG
DATTAYANSVFNIIQATSANVARLLSVITRDIVYDDIKSLQYELYQQVYRRVNFDPSFVE
KFYSYMCKNFSLMILSDDGVVCYNNTLAKQGLVADISGFREILYYQNNVYMADSKCWVEP
DLEKGPHEFCSQHTMLVEVDGEPRYLPYPDPSRILGACVFVDEVDKTEPVAVMERYIALA
IDAYPLVHHENEEYKKVFFVLLSYIRKLYQELSQSMLIDYSFVMDIDKGSKFWEQEFYEN
MYRAPTTLQSCGVCVVCNSQTILRCGNCIRKPFLCCKCCYDHVMHTDHKNVLSINPYICS
QPGCGEADVTKLYLGGMSYFCGNHKPKLSIPLVSNGTVFGIYRANCVGSENVDDFNQLAT
TNWSTVEPYILANRCSDSLRRFAAETVKATEELHKQQFASAEVREVISDRELILSWEPGK
TRPPLNRNYVFTGYHFTRTSKVQLGDFTFEKGEGRDVVYYRATSTAKLSPGDIFVLTSHN
VVSLVAPTLCPQQTFSRFVNLRPNVMVPECFVNNIPLYHLVGKQKRTTVQGPPGSGKSHF
AIGLAAYFSNARVVFTACSHAAVDALCEKAFKFLKVDDCTRIVPQRTTVDCFSKFKANDT
GKKYIFSTINALPEVSCDILLVDEVSMLTNYELSFINGKINYQYVVYVGDPAQLPAPRTL
LNGSLSPKDYNVITNLMVCVKPDIFLAKCYRCPKEIVDTVSTLVYDGKFVANNPESRECF
KVVVNNGNSDVGHESGSAYNTTQLEFVKNFVCRNKQWREATFISPYNAMNQRAYRMLGLN
VQTVDSSQGSEYDYVIFCVTADSQHALNINRFNVALTRAKRGILVVMRQRDELYSALKFT
ELDSEAILQGTGLFKICNKEFSGVHPAYAVTTKALAATYKVNDELAALVNVEAGSEITYK
HLISLLGFKMSVNVEGCHNMFITRDEAIRNVRGWVGFDVEATHACGTNIGTNLPFQVGFS
TGADFVVTPEGLIDTSIGNNFEPVNSKAPPGEQFNHLRALFKSAKPWHVIRPRIVQMLAD
NLCNVSDCVVFVTWCHGLELTTLRYFVKIGKEQVCSCGSRATTFNSHTQAYACWRHCLGF
DFVYNPLLVDIQQWGYSGNLQFNHDLHCNVHGHAHVASADAIMTRCLAINNAFCKDVNWE
LQYPHIANEDEVNSSCRYLQRMYLNACVDALKVNVVYDIGNPKGIKCVRRGDVNFRFYDK
NPIVPNVKQFEYDYSQHKDKFADGLCMFWNCNVDCYPENSLVCRYDTRNLSVFNLPGCNG
GSLYVNKHAFHTPKFDRISFRNLKAMPFFFYDSSPCETIQVDGVAQDLVSLATKDCITKC
NIGGAVCKKHAQMYAEFVASYNAAVTAGFTFWVTNNFNPYNLWKNFSALQSIDNIAYNMY
KGGHYDAIAGEIPTVITGDKVFVIDQGIEKAVFVNQTTLPTSVAFELYAKRNIRTLPNNR
ILSGLGVDVTYGFVIWDYANQTPLYRNTVKVCAYTDIEPTGLIVLYDDRYGDYQAFLAAD
NAVLVSTQCYKRYSYVEIPSHLLVQNGMPLKDGANLYVYKRVNGAFVTLPNTLNTQGRNY
EAFEPRSDVERDFLDMSEEDFIEKYGKDLGLQHILYGEVEKPQLGGLHTVIGMYRLLRAN
KLDAKSVTNSDSDVMQNYFVLADNGSYKQVCTVVDLLLDDFLELLRNILKEYGTNKSKVV
TVSIDYHSVNFMAWFEEGSIKTCYPQLQSAWTCGYNMPELYKVQNCVMEPCNIPNYGVGI
TLPSGIMMNVAKYTQLCQYLSKTTMCVPHNMRVMHFGAGSDKGVAPGSTVLKQWLPEGTL
LVDNDIVDYVSDAHVSLLSDCNKYKTEHKFDLVISDMYTDNDSKKKHEGIVANNGNDDVF
IYLANFLRNNLALGGSFAIKVTETSWHESLYDIAQDCAWWTMFCTAVNASSSEAFLLGIN
YLGASANVKVSGKTLHANYIFWRNCNYLQTSAYSTFDVAKFGLKLKATPVVNLKTEQKTD
LVVNLLRNGKLLIRDVGEVTVFSDHFVCTM
Download sequence
Identical sequences A0A1P8SSH6

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