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Domain assignment for A0A1S3RTS1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1S3RTS1
Domain Number 1 Region: 533-635
Classification Level Classification E-value
Superfamily Elongation factor TFIIS domain 2 9.29e-32
Family Elongation factor TFIIS domain 2 0.0066
Further Details:      
 
Domain Number 2 Region: 2-91
Classification Level Classification E-value
Superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 3.01e-26
Family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.0000301
Further Details:      
 
Domain Number 3 Region: 663-702
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 6.12e-16
Family Transcriptional factor domain 0.00053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1S3RTS1
Sequence length 704
Comment (tr|A0A1S3RTS1|A0A1S3RTS1_SALSA) serine/arginine repetitive matrix protein 1-like isoform X9 {ECO:0000313|RefSeq:XP_014055696.1} KW=Complete proteome; Reference proteome OX=8030 OS=Salmo salar (Atlantic salmon). GN=LOC106605011 OC=Salmoniformes; Salmonidae; Salmoninae; Salmo.
Sequence
MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKGFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNEMKNGVDSNKSTGFPVRSPLEKDTSHKRL
DVSDSDPESEKKEYSDKRRKEKHNVEHKKDERAVDLKKERYTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLKEPKKERHFEKSRKERHVQEPKNESHTDEPRRESYKDELRKERHTEER
RKEIPMYEPPQERPEENHRQGFERRSVLDDLYPSCYSPPRPPRPPRLPPLVRRMSAEVNK
GVKKEVKKERERRDSSDTLSPSHPRPIPPSRRPSVKVKKERKKAPPDPNSPLPPLHPRPS
MPTAAEVKKERKEPPRISVVRKEPPDPNAPFAPLPLHLHPPPPVKRPSVEVKKEREESSD
YKPVSLKVTSSDHVKKDRKDSDTKVPQKTSVDAKKERKDSTDSKPSHSVKRHSTDSKSDR
KEFHGSKSSHPGPLQRKSSTDSIERRGKPEMPKIPTTPTSPMSPSFSSAGVPLSPCLATG
ETIRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIEDHIYTEMGSTDMKYKNRVRSRISN
LKDPKNPGLRRNVLAGGIELRRFAIMSAEEMASDELKQLRNNLTKEAIREHQLSKTSGTI
SDLFQCSKCSKKNCTYNQMQTRSADEPMTTFVLCNECGNRWKFC
Download sequence
Identical sequences A0A1S3RTS1
XP_014055696.1.97760

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