SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1S3ZBV2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1S3ZBV2
Domain Number 1 Region: 243-309
Classification Level Classification E-value
Superfamily XPC-binding domain 5.36e-23
Family XPC-binding domain 0.0003
Further Details:      
 
Domain Number 2 Region: 307-370
Classification Level Classification E-value
Superfamily UBA-like 0.00000000000000173
Family UBA domain 0.0019
Further Details:      
 
Domain Number 3 Region: 6-69
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.000000000000843
Family Ubiquitin-related 0.0012
Further Details:      
 
Domain Number 4 Region: 139-190
Classification Level Classification E-value
Superfamily UBA-like 0.0000000000239
Family UBA domain 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1S3ZBV2
Sequence length 371
Comment (tr|A0A1S3ZBV2|A0A1S3ZBV2_TOBAC) ubiquitin receptor RAD23c-like {ECO:0000313|RefSeq:XP_016461712.1} KW=Complete proteome; Reference proteome OX=4097 OS=Nicotiana tabacum (Common tobacco). GN=LOC107785012 OC=Nicotianoideae; Nicotianeae; Nicotiana.
Sequence
RWLIIQVVDVKRNIESVQGQDVYPAAQQMLIHQGKVLKDSTTLEENKVAENSFVVIMLSK
NKASSTGTSSSPAAPSDTAQPASSTGQAQARQTITAPQALVASAAPPQSASEFAPAPVPG
DASTVTDVYDQAASNLVAGSKLEATVQHILDMGGGSWDRETVVRALRAAYNNPERAVDYL
YSGVPEQAEIPPVAPTAAATASGQAVNPSAQEASQPAVPSSGPNANPLDLFPQGLPNVGS
NAGSGNLDFLRNSPQFQALRTMVQANPQILQPMLQELGKQNPHLMRLIQEHQPDFLRLIN
EPVEGEGNALGQMAGAISQAVTVTPEEREAIERLEAMGFDRALVLEVYFACNKNEELAAN
YLLDHMHEFDE
Download sequence
Identical sequences A0A1S3ZBV2
XP_016461712.1.3737

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]