SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1U8E0E2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1U8E0E2
Domain Number 1 Region: 71-178
Classification Level Classification E-value
Superfamily SRCR-like 4.45e-45
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0000866
Further Details:      
 
Domain Number 2 Region: 300-409
Classification Level Classification E-value
Superfamily SRCR-like 3.92e-42
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0000664
Further Details:      
 
Domain Number 3 Region: 174-281
Classification Level Classification E-value
Superfamily SRCR-like 5.75e-29
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00081
Further Details:      
 
Domain Number 4 Region: 1-73
Classification Level Classification E-value
Superfamily SRCR-like 0.00000000000000288
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1U8E0E2
Sequence length 598
Comment (tr|A0A1U8E0E2|A0A1U8E0E2_ALLSI) antigen WC1.1-like {ECO:0000313|RefSeq:XP_014382965.1} KW=Complete proteome; Reference proteome OX=38654 OS=Alligator sinensis (Chinese alligator). GN=LOC102380074 OC=Alligator.
Sequence
MKDASVVCRQLHCGVAESTYNLTKPEQGTGPVGLRGVRCAGHESNLTLCNTNLSETEQAV
ITEDVGVVCSGSRQLRLVNATGRCAGRVEIYYQGTWGTVCDDSWDLSDSNVVCKQLGCGH
AIHVAASAHYGEGSGQIWLDDVNCSGNESELWECPSRGWGQHNCRHKEDAGVLCSEFMDL
RLVNGDDCSGRLEVFYNGTWGSVCSSPMAQATVDIVCKQLGCGNGGEFAEDYLYGQGSGP
TWLDRVECRQQHSSLWECPSKAWDPHSCHDRGEETHITCAGKKENTTRTRYVACPNSTDC
TDKEKLRIVGTEDRCSGRVEVWHHGSWGTVCDDSWDLADANVVCKQGGCGAAVSALGEAA
FGAGTGPIWLDKVNCKGTESSLWDCCAEPWGNSRCQHKEDAAVICTNGTETTASPQKTGS
GRHSGPLPDAVYEEIDYNLMREKLEMFGRSVSYSEDSVMKLQYYTGDSEEGNDPGSAQEE
ASPGDFQLDYDSVEEPALSNAHVPPDSQEALPLAREVTEDGYDEAGEVPDLAHFPVSGLT
GVPAERENLQTYSDSQTERSMPWLKSEGIFEPVQEDPALLPGDTGYDDVEEVMSVSSL
Download sequence
Identical sequences A0A1U8E0E2
XP_014382965.1.24877

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]