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Domain assignment for A0A200LK57 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A200LK57
Domain Number 1 Region: 15-122
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 2.75e-38
Family Sigma2 domain of RNA polymerase sigma factors 0.00089
Further Details:      
 
Domain Number 2 Region: 200-283
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 4.67e-19
Family Sigma4 domain 0.01
Further Details:      
 
Weak hits

Sequence:  A0A200LK57
Domain Number - Region: 127-219
Classification Level Classification E-value
Superfamily FAT domain of focal adhesion kinase 0.0863
Family FAT domain of focal adhesion kinase 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A200LK57
Sequence length 284
Comment (tr|A0A200LK57|A0A200LK57_SHISO) RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961} KW=Complete proteome OX=624 OS=Shigella sonnei. GN=CBL27_03680 OC=Enterobacteriaceae; Shigella.
Sequence
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMHGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
Download sequence
Identical sequences A0A0F6MHZ3 A0A127GQQ1 A0A200LK57 A0A226KF59 D2A9Q8 F5N9P3 F5P2X1 I6B7V6 Q0SZL1 Q83PU0
gi|24114721|ref|NP_709231.1| gi|384545022|ref|YP_005729086.1| gi|110807289|ref|YP_690809.1| NYSGXRC-13791b gi|30065262|ref|NP_839433.1| NP_709231.1.23235 WP_000130216.1.101522 WP_000130216.1.101545 WP_000130216.1.101667 WP_000130216.1.10226 WP_000130216.1.10361 WP_000130216.1.11912 WP_000130216.1.12965 WP_000130216.1.13157 WP_000130216.1.17680 WP_000130216.1.17711 WP_000130216.1.19024 WP_000130216.1.19148 WP_000130216.1.19453 WP_000130216.1.20136 WP_000130216.1.20484 WP_000130216.1.21029 WP_000130216.1.22098 WP_000130216.1.22328 WP_000130216.1.22409 WP_000130216.1.22522 WP_000130216.1.22771 WP_000130216.1.22896 WP_000130216.1.23622 WP_000130216.1.2395 WP_000130216.1.2433 WP_000130216.1.24547 WP_000130216.1.25038 WP_000130216.1.25799 WP_000130216.1.26005 WP_000130216.1.27472 WP_000130216.1.27957 WP_000130216.1.28491 WP_000130216.1.2931 WP_000130216.1.30640 WP_000130216.1.3176 WP_000130216.1.35368 WP_000130216.1.35649 WP_000130216.1.35698 WP_000130216.1.36129 WP_000130216.1.37155 WP_000130216.1.37549 WP_000130216.1.37637 WP_000130216.1.37730 WP_000130216.1.37830 WP_000130216.1.38119 WP_000130216.1.38202 WP_000130216.1.39063 WP_000130216.1.39286 WP_000130216.1.39358 WP_000130216.1.41339 WP_000130216.1.41372 WP_000130216.1.41391 WP_000130216.1.41449 WP_000130216.1.41513 WP_000130216.1.41539 WP_000130216.1.42448 WP_000130216.1.43133 WP_000130216.1.43561 WP_000130216.1.44222 WP_000130216.1.4445 WP_000130216.1.44627 WP_000130216.1.44671 WP_000130216.1.45000 WP_000130216.1.4535 WP_000130216.1.45392 WP_000130216.1.45799 WP_000130216.1.45949 WP_000130216.1.46429 WP_000130216.1.47775 WP_000130216.1.4953 WP_000130216.1.49823 WP_000130216.1.51206 WP_000130216.1.51600 WP_000130216.1.51736 WP_000130216.1.52406 WP_000130216.1.5291 WP_000130216.1.54032 WP_000130216.1.54755 WP_000130216.1.54989 WP_000130216.1.55070 WP_000130216.1.56358 WP_000130216.1.57150 WP_000130216.1.57348 WP_000130216.1.57395 WP_000130216.1.58136 WP_000130216.1.59165 WP_000130216.1.59226 WP_000130216.1.60342 WP_000130216.1.63350 WP_000130216.1.63554 WP_000130216.1.63612 WP_000130216.1.64153 WP_000130216.1.64793 WP_000130216.1.64930 WP_000130216.1.65484 WP_000130216.1.65662 WP_000130216.1.66059 WP_000130216.1.66978 WP_000130216.1.6701 WP_000130216.1.67412 WP_000130216.1.67802 WP_000130216.1.6897 WP_000130216.1.69404 WP_000130216.1.69868 WP_000130216.1.70191 WP_000130216.1.70251 WP_000130216.1.70341 WP_000130216.1.71158 WP_000130216.1.71724 WP_000130216.1.72342 WP_000130216.1.72449 WP_000130216.1.72698 WP_000130216.1.72748 WP_000130216.1.74509 WP_000130216.1.75124 WP_000130216.1.75505 WP_000130216.1.76447 WP_000130216.1.76460 WP_000130216.1.76957 WP_000130216.1.77198 WP_000130216.1.77813 WP_000130216.1.78041 WP_000130216.1.78377 WP_000130216.1.80061 WP_000130216.1.80463 WP_000130216.1.80966 WP_000130216.1.81582 WP_000130216.1.81876 WP_000130216.1.81956 WP_000130216.1.82507 WP_000130216.1.83286 WP_000130216.1.83321 WP_000130216.1.83340 WP_000130216.1.84164 WP_000130216.1.84986 WP_000130216.1.84990 WP_000130216.1.85008 WP_000130216.1.85416 WP_000130216.1.85969 WP_000130216.1.86483 WP_000130216.1.88735 WP_000130216.1.8985 WP_000130216.1.89998 WP_000130216.1.90065 WP_000130216.1.90314 WP_000130216.1.92123 WP_000130216.1.93023 WP_000130216.1.93605 WP_000130216.1.94190 WP_000130216.1.95254 WP_000130216.1.95712 WP_000130216.1.95801 WP_000130216.1.96128 WP_000130216.1.96608 WP_000130216.1.96680 WP_000130216.1.96769 WP_000130216.1.96932 WP_000130216.1.97279 WP_000130216.1.97798 WP_000130216.1.97815 WP_000130216.1.98323 WP_000130216.1.99119 198214.SF3479 198215.S4284 373384.SFV_3464

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