SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A221IK41 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A221IK41
Domain Number 1 Region: 187-383
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.59e-51
Family mu transposase, core domain 0.058
Further Details:      
 
Domain Number 2 Region: 392-452
Classification Level Classification E-value
Superfamily mu transposase, C-terminal domain 0.00000144
Family mu transposase, C-terminal domain 0.0082
Further Details:      
 
Weak hits

Sequence:  A0A221IK41
Domain Number - Region: 81-106
Classification Level Classification E-value
Superfamily TrpR-like 0.00837
Family SPO1678-like 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A221IK41
Sequence length 554
Comment (tr|A0A221IK41|A0A221IK41_9GAMM) Uncharacterized protein {ECO:0000313|EMBL:ASM54089.1} KW=Complete proteome OX=28109 OS=Pseudoalteromonas nigrifaciens. GN=PNIG_a2025 OC=Pseudoalteromonadaceae; Pseudoalteromonas.
Sequence
MHPAVQRFNRLPSTGSELSWQNASETARKKAQSRAVLVRHLLTQEGGLPKAFELLVTNYR
ANLAPSTLMVAIEVLGKLPGRATIYNWCNAYKDNGINGLLPNHKGKAQTQYSWLARSLEL
YHSPNSPSFAQVSDQLNKEGYKAQHHQVRRFINALPHELGPQSPYRMGAKLYREKHKDHL
LRSTDNIKPGVMYNGDGHTIDVYLAHPKTGKPYRAELTAFQDVASRCIVGWELGYAESTI
DTLAAISRAIKVHNNVPAMFYLDNGSGYKNKLMNDDTTGFYAQFEIDVIFAIPGNARAKW
IERFFLHMEDRVGKKFSTYCGRHHNDRHKQLVLKEAKQGKRKLPSVDEWIAEFKAFLNDY
HNSEHPEVKGKTRQQVWDENVDRVPPVEGDFVMLPRETVNIRRGRFRLHQRDYSADFLHQ
FNGQELIAAYDMHDDSYTKLYKLNGEFLMVANLKSKTHAIPSSRVEQAQQKRLTGREKRL
QVHLQEVRAQEASTRIIDIDAVTELAAPVNAITEQLTPVNIFDFDVAPAVPQHEIDLNEL
LDQPLLRKEHSYEL
Download sequence
Identical sequences A0A221IK41 Q3IGI7
326442.PSHAa1523 gi|77360464|ref|YP_340039.1| WP_011328201.1.36504 WP_011328201.1.42639

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]