SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A2G2X9H7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A2G2X9H7
Domain Number 1 Region: 549-718
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.32e-42
Family Retroviral integrase, catalytic domain 0.0037
Further Details:      
 
Domain Number 2 Region: 868-1090,1119-1235
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 4.89e-18
Family RNA-dependent RNA-polymerase 0.085
Further Details:      
 
Domain Number 3 Region: 31-71
Classification Level Classification E-value
Superfamily Skp1 dimerisation domain-like 0.000000235
Family Skp1 dimerisation domain-like 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A2G2X9H7
Sequence length 1253
Comment (tr|A0A2G2X9H7|A0A2G2X9H7_CAPBA) Uncharacterized protein {ECO:0000313|EMBL:PHT54001.1} KW=Complete proteome; Reference proteome OX=33114 OS=Capsicum baccatum (Peruvian pepper). GN=CQW23_08463 OC=Capsiceae; Capsicum.
Sequence
MKKLKEATSSRLKKSNSMAASKKKFDDFGPPRLPKISPVRLADMIKGKTPEEIRKTFNIK
NNFIPEEEEERDLKCPETRHCQGANRVDYDFATRLEHLPLFACFHDGFVCFHCCNSIIQH
SIAKTARKMTTESQMMDATTSMGATNIATSSRTNAPPTMAPAEKPEKFSGIDFKRWQQKM
FFYLTTLCLQRNYILSGLQDDLYNVYSGTKTSKELWEALERKYKTKDAGIKKFLVARFLD
FKMIDSKSVVSQVQELQVIIHDLLAEGLIVNDAFQGAAIVEKLPPLWKDFKNYLKHKRKE
MSIEDLIVRLHIEKTIKLPKEDCRAPKKGKKKDQANLIESNKDYDDLCAMFTEFNMVGNP
RAWWMDSGATRHVCASKELFSTYALAQAEETIYMANSATAKVEGIGKVCLKMTSGKVLTL
NNVLYVPELRRNLISVSLLDKNGFKCVTVSGKIVVSKGEMYVGKGYLEEGLYKMNVMNIE
MNKNSNSSYLLESYNLWHERLGHVNYKTLRKLINLEVLPNFECNKSKCQTCVESKYAKHP
YKSVERNSNPLDLIHTDICDMKSTPSRGGKKYFITFIDDCTRYCYVYLLNSKDEAIDAFR
QYKTEVENQLDKRIKMIRSDRGGEYESPFAQICVENGIIHQTTAPYSPQSNGIVERKNRT
LKEMMNALIISSGLPQNLWGEAILTANRILNRVPHSKTQSIPYEKWKGRKPNLKYFKVWG
CLAKVQVPIPKTVKIGPKTVDCMFIVYAKSSKACRFLVHKSEHSDINENMIIESDNAEFF
ENIYPYKTRHEQSSGGSKRPRDEPSENVHNEENPRRSTRQRTSTSFGSDFVTFLLENEPR
TFKEAMSSSDSSFWKEAVNSEIDSILSNHTWELVDLPPGNKPLGSKWIFKRKMKTDGTID
KYKARLVVKGFNQKEGIDYFDTYSPVTRITSIRMLIALAAVYNLQIHQMDVKIVFLNGEL
EEEICMKQPEGFMVPGKKNKVCKLVKSLYGLKQTPKQWHAKFDQTMLANGFKINECDKCV
YIKDTPNHQVIVCLYEDDMLIINRDICDINATKRMLKSKFDMKDLRVADVILGIRIHRTP
QGLALQQSHYIKKILDKFKYIEFDIAKTPLDANFALRKNEGESDSQLEYARVLGCLMYIM
NCTRPDIACTISKLSRYTSNPNKTHWMAMKRVLGYLKYTQDYALHYNKYPAVLEGYSDAN
WITGSNEVKSTSGYVFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAE
Download sequence
Identical sequences A0A2G2X9H7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]