SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0PYN6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  A0PYN6
Domain Number - Region: 314-393,431-442
Classification Level Classification E-value
Superfamily Pseudo ankyrin repeat-like 0.0863
Family Pseudo ankyrin repeat 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0PYN6
Sequence length 479
Comment (tr|A0PYN6|A0PYN6_CLONN) ISBma2, transposase {ECO:0000313|EMBL:ABK60744.1} KW=Complete proteome; Reference proteome OX=386415 OS=Clostridium novyi (strain NT). GN=NT01CX_1406 OC=Clostridium.
Sequence
MLTNNERKQNQLELVYIENLVPENHILRKIDKYIDFSFIRDLTKDLYCPDNGRPSVDPVV
LFKMLFIGYLFGIRSERQLVKEIQVNVAYRWFLGYGLTDKIPSHSTISQNRTKRFSNTNI
HQEIFDNIVFQAINRNLVDGKILYTDSTHLKANANKHKFIKKEITKSTKEYFDELENDIN
KDRINHNKKPLKKKTKIAETKEIKVSTTDPDSGYMVRDGKPKGFFYLDHRTVDGKYNIIT
DVHVTPGNINDVDPYVKRIETQIEKFNFNTKYLVADAGYSTNPICKQISDKNYQGVFGFR
LGPHVKGKYTKYRFQYVKELDGYVCINNCFLKYRTTTREGYKEYLSNAEHCASCKYKNNC
LTSDKSINRTIRRHVWEDYKDQIFRFTKTEKGKNIYKRRKEKIERSFADSKELHGLRYCR
MRGIKNVSEQCLLTAAVQNMKKIAMVLSHYFLCTLIQIYSKLTYIINIFRMLSHKRILA
Download sequence
Identical sequences A0PYN6
gi|118443244|ref|YP_877488.1| WP_011721496.1.12664 386415.NT01CX_1406

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]