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Domain assignment for A8GBM2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A8GBM2
Domain Number 1 Region: 158-294
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 3.14e-17
Family GntR ligand-binding domain-like 0.018
Further Details:      
 
Domain Number 2 Region: 3-64
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.000000000547
Family GntR-like transcriptional regulators 0.037
Further Details:      
 
Domain Number 3 Region: 94-151
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0000156
Family Transcriptional regulator Rrf2 0.091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A8GBM2
Sequence length 301
Comment (tr|A8GBM2|A8GBM2_SERP5) Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABV40512.1} KW=Complete proteome OX=399741 OS=Serratia proteamaculans (strain 568). GN=Spro_1408 OC=Yersiniaceae; Serratia.
Sequence
MSRTQNLRHNVVNQMIDGINNNHLRSPLPSQAALAEMYNISRTTVRHTLTHLFQRGVLEK
VGDDYVILRQPQPEDGFDCQSPSLDEQGKRFEKAFYQMINQKQLRAGDSFSELQLARAVN
VSPVVVREFLLHFSRYNLIESSKRGQWRMKQFDQRYAEQLFELRQMLETHALSHFINLPA
HDPRWLQARELLSRHRQLREDISDNYRLFSQLDRDFHLLILSAANNPFFNQSLEIISVIF
HFHYQWDETDLKQRNIIAIEEHMTILSALICRNDQEAINALHRHLDTAKQSMIRSLNQTI
A
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Identical sequences A8GBM2
Aqu1.206822|PACid:15705350 gi|157369651|ref|YP_001477640.1| 399741.Spro_1408 WP_012005841.1.35080

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