SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A9KQH3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A9KQH3
Domain Number 1 Region: 39-314
Classification Level Classification E-value
Superfamily Fe-only hydrogenase 3.27e-58
Family Fe-only hydrogenase 0.00037
Further Details:      
 
Domain Number 2 Region: 6-77
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 9.57e-17
Family Short-chain ferredoxins 0.048
Further Details:      
 
Domain Number 3 Region: 409-511
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000152
Family Heme-binding PAS domain 0.034
Further Details:      
 
Weak hits

Sequence:  A9KQH3
Domain Number - Region: 525-572
Classification Level Classification E-value
Superfamily MukF C-terminal domain-like 0.0131
Family MukF C-terminal domain-like 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A9KQH3
Sequence length 577
Comment (tr|A9KQH3|A9KQH3_LACP7) Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABX40482.1} KW=Complete proteome; Reference proteome OX=357809 OS=ISDg) (Clostridium phytofermentans). GN=Cphy_0092 OC=Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.
Sequence
MNVIGFKEAKCKNCYKCVRNCDVKAITVKDAQAYIMNDKCILCGHCLEVCPQNAKTLISD
LERVKGYLREGYQTVVSLAPAYLGVLHYNTPGQVISALLKLGFTAVRETAEGAAYVTREY
DNLIAAGEMENIITTCCPSLNDLVEIYYPSLTKYLAPVVSPMIAHGKIIREQYGPNVKVV
FLGPCISKKREAESDPRTVGIIDAVINFKELEEWLLEEGIDIFKQPDTPPDNPNPLVNRL
YPISSGVLSSVVASKNTSDHYRKFYVHGINNCIDLLESMNRGEITGCFIEANICNGGCIK
GPAIDRTRISRFKVKLDMEESIPKAPITEEDFFTKSPIHFDKFFLGRSPKDPVPTEKEVM
QILAKIGKTKPEDMLNCGACGYATCRDKANAVYQGKAELNMCIPYMHERAQSMANFVLDT
TPNIIIIVDAEMKIMEFSAAAEKYFRTPRSVAKEMYLYEFIDHSNFQAVLETQKDIIGKR
VIYEDRNLATLQTIVYSKEQNCVLGIFQDISHQEELDRKAYKVKVETIEMAQRVIDKQMK
VAQEIAGLLGETTAETKVTLTKLRDTILNDGKPYDIF
Download sequence
Identical sequences A9KQH3
357809.Cphy_0092 gi|160878253|ref|YP_001557221.1| WP_012198125.1.8979

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]