SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for E0UMY1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  E0UMY1
Domain Number 1 Region: 221-420
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.23e-17
Family Retroviral integrase, catalytic domain 0.094
Further Details:      
 
Domain Number 2 Region: 450-508
Classification Level Classification E-value
Superfamily mu transposase, C-terminal domain 0.0000017
Family mu transposase, C-terminal domain 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) E0UMY1
Sequence length 662
Comment (tr|E0UMY1|E0UMY1_CYAP2) Transposase-like Mu {ECO:0000313|EMBL:ADN18311.1} KW=Complete proteome; Reference proteome OX=497965 OS=Cyanothece sp. (strain PCC 7822). GN=Cyan7822_6548 OC=Cyanothecaceae; Cyanothece.
Sequence
MTLSGINFNEIELDADEEDLKALENPKIPQKSLKLINTELPPKVEQKLDALNAIGQASNK
KERAEAIKQAAISLGKSARTIRRMLAKIAHEGVATLAVGRQDKGQYRISKQWRDFIIKLY
KWGQKSGSKSNISQLYVAITSLASQGEKLRMDVQRKDGIAKYLKPYPEVLEDLIALKYPS
HVTVYKVINDELQRKKKFKARHPGADIDHQIVQTIDENLHITHSNQIWQADHTQLDVFIV
ENLKNKDSLLKPEIIRDRKGEPIRPYLTVIMDSYSGCIMGYYLGFVAADSHRVALALRNA
ILPKPVQEKYGLINEWVEHGIPEYLVTDRAREFKSDHMKLVSTQLDFKWKLRAFPSAGGL
VETIFNQTNNEVLKNLPGYTGSKVDERPKNAENHACMTFEELEKELVQYFVDHYNQHQYP
KMKIEPQFEVLTRSKRWQSGLISGATIIDERTLDICLLKQAHRRVQKLGTIQFENLIYIG
DCLRDFIGEEISLRYDPRNIVTLLAYTSSNQEEPSEFIGVIKARHFEHEQMTFDELRWIV
QKLKRQWKNADNISILNERYNHLNFIEQKRVKKRQKRKKAQQKRDETTNESKIVEIFPQN
ALEPDDKTVIEEATEANTMGQKRRLSKIHQSSLPESHPRVKRRRSGIAVHVQDWNEYKKN
NW
Download sequence
Identical sequences E0UMY1
WP_013335053.1.91546 gi|307591578|ref|YP_003900377.1| gi|307591578|ref|YP_003900377.1|NC_014534

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]