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Domain assignment for F6SEF1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F6SEF1
Domain Number 1 Region: 6-119
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 4.18e-24
Family Rap30/74 interaction domains 0.00016
Further Details:      
 
Domain Number 2 Region: 176-241
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.04e-21
Family DNA-binding domain from rap30 0.00028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F6SEF1
Sequence length 257
Comment (tr|F6SEF1|F6SEF1_CIOIN) general transcription factor IIF subunit 2 {ECO:0000313|RefSeq:XP_002119394.2} KW=Complete proteome; Reference proteome OX=7719 OS=Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis). GN=LOC100179943 OC=Phlebobranchia; Cionidae; Ciona.
Sequence
MTDPGDKTLDLSGAKHDVWLVKVPKYLATQWLNAPDGMSVGKLRITKNAGRAEVTYSMDK
NLTQANSSEKFLATDHKFVLQGTCGQSLAVFSTTSGSNQKGEKRAMEGRVVQKVDCRPIV
SHNYMQLKRAQMIEASKPQRTTKQLAEAVKTVYKPVTKIKEQIEYDAMKKEKGKKMRVDK
DVLQSILFNAFEKHQYYNIKDLQNITQQPVPFLKEVLREIGMYNKHPGHRHMWELKPEYR
HDKVEEKKEDSDDIDSS
Download sequence
Identical sequences F6SEF1
ENSCINP00000012710 7719.ENSCINP00000012710 XP_002119394.2.78797 ENSCINP00000012710

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