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  Home > Genomes > Uniprot 2018_03 genome > H0ZBT3

Domain assignment for H0ZBT3 from Uniprot 2018_03 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  H0ZBT3
Domain Number 1 Region: 1876-1925
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000753
Family Laminin-type module 0.051
Further Details:      
 
Domain Number 2 Region: 1817-1859
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000213
Family Laminin-type module 0.0081
Further Details:      
 
Domain Number 3 Region: 501-549
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000474
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 4 Region: 1923-1978
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000558
Family Laminin-type module 0.0035
Further Details:      
 
Domain Number 5 Region: 259-320
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000921
Family Laminin-type module 0.032
Further Details:      
 
Domain Number 6 Region: 1395-1443
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000151
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 7 Region: 318-377
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000195
Family Laminin-type module 0.044
Further Details:      
 
Domain Number 8 Region: 637-685
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000391
Family Laminin-type module 0.013
Further Details:      
 
Domain Number 9 Region: 1485-1533
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000809
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 10 Region: 1977-2021
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000142
Family Laminin-type module 0.0043
Further Details:      
 
Domain Number 11 Region: 592-639
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000254
Family Laminin-type module 0.016
Further Details:      
 
Domain Number 12 Region: 734-784
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000262
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 13 Region: 388-433
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000419
Family Laminin-type module 0.02
Further Details:      
 
Domain Number 14 Region: 684-731
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000865
Family Laminin-type module 0.018
Further Details:      
 
Domain Number 15 Region: 2024-2073
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000109
Family Laminin-type module 0.029
Further Details:      
 
Domain Number 16 Region: 454-497
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000117
Family Laminin-type module 0.029
Further Details:      
 
Domain Number 17 Region: 1539-1582
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000162
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 18 Region: 547-594
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000391
Family Laminin-type module 0.025
Further Details:      
 
Domain Number 19 Region: 1778-1819
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000753
Family Laminin-type module 0.068
Further Details:      
 
Weak hits

Sequence:  H0ZBT3
Domain Number - Region: 787-827
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00017
Family Laminin-type module 0.077
Further Details:      
 
Domain Number - Region: 1446-1487
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0201
Family Laminin-type module 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) H0ZBT3
Sequence length 2164
Comment (tr|H0ZBT3|H0ZBT3_TAEGU) Laminin subunit alpha 5 {ECO:0000313|Ensembl:ENSTGUP00000008041} KW=Complete proteome; Reference proteome OX=59729 OS=Taeniopygia guttata (Zebra finch) (Poephila guttata). GN=LAMA5 OC=Estrildidae; Estrildinae; Taeniopygia.
Sequence 
GHSLHPPYFNLAEGTRISATATCGEEAAGAGSRRAVEDLYCKLVGGPVAGGDPNQTIQGQ
YCDICSSANSNKAHPITNAIDGTERWWQSPPLSRGLEFNQVNVTLDLGQLFHVAYVLIKF
ANSPRPDLWVLERSTDFGLTYEPWQYFASSKRDCIEKFGQHTVDRITRDDHAICTTEYSR
IVPLENGEIVVSLVNGRPGAMNFSYSPLLRNFTKATNIRLRFLQTNTLLGHLMGKALRDP
TVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPSDPYRLQCDCQHHTCGGSCDRCCPGYN
QFPWKPATADSANECQPCNCNGHAYDCYYDPEVDRHKASRSREDKFEGGGVCIDCQHHTT
GINCERCIPGYYRSPDHPIDSPYVCYRCNCESDFTDGTCEDLTGRCYCKPNFTGEHCQAC
AEGYLNFPHCYPVPAFSQNSTGEQVLPAGQIINCDCYAGGTEGNACRKDPRVGMCVCKPN
FQGTHCDQCAPGHYGPSCQPCQCSGPGQYDGTCDSETGQCLCRTGFEGQSCDQCAPGYFN
YPLCQLCGCSAVGTLPGGCDSAGNCFCRAEFAGPRCEQCSPGHHSYPHCYACSCDSRGAV
DNNCSPAGQCRCHGNFAGHTCNQCALGFYGYPSCTPCQCSREGSLHGTCEQDTGQCSCRP
KVTGLRCDTCVPGAYGFPHCQVGSCNPAGLETADPSLAPGSCACRAYVEGPACDRCKPGY
WNLTPENPYGCLSCKCDTKGTVSGITECRQGDGQCFCKATVCGQFCSACKDGYFNMENAN
YFGCQGCRCDVGGALGPSCEERSGACRCRQSTRGPTCTQPARDHYFPDLHHLKFELEEGT
TPSGRAVRFGYNPLEFEGFSWRGYAQMSSIQPKVVVTLNVTSPDLFRLVFRYVSRGPASV
EGRVSVVEEGKFNVCGNCTEQTKQIVFAPSTEPAFVTVPQNSFGEPFVLNPSTWSLVVEA
QGVLLDYLVLLPSSYYEAPILQLKVTEPCVYQPAPEQATQNCLLYKYLSVEGFPAVAGLD
AVCRLDNRLPRPCPTEQLTPFHPSMATCSGTDVEVQLSLPVAQPGKYVLLVEYANTNALQ
TVGIAVSSPPSATQQGTFTFYPCAYSFLCRGIAVDSQSRMATFELTSEATVRFTSDLADF
FLHKVYLIPAAQFTVELIEPRVHCISVHGTFSSNSSSCVPSRFLKLSQSIIWRAQALPIA
PEVPLAQAVHVAPAGVPVEPAPRPPTAMDPTAELILLQSPQAAVVFNSRIQTLGRYAFIL
HFYQPSHPTFPVEVLINGGRIWQGQTNANFCPHGYGCRSLVVSEDQIILDVTDNDLTVVV
RVPEGKQLWLDYILVVPEDSYTSQYLQEEPLDKSYDFISSCGINSFYINPSTSSRFCRDS
AISLSLFYNNGAQPCRCHEAGARGSQCQPFGGQCPCKSNVIGRECSRCATGYWGFPNCRP
CDCGTRLCDEVTGQCICPPHTLKPECVVCEPQTFGCHPLIGCEDCNCSRPGVQELTEPGC
DPFGGQCPCKSNVIGRECSRCATGYWGFPNCRRENGHQAGTQHSMCEPVTGQQLCKENVE
GLRCDQCRLGTFSLDATNPKGCTKCFCFGATDRCRSAEKHRAEFVDMNGWLLLSSDRQEV
PTALSPREQLVTADLKNLPDAYQELYWVAPNSYLGDQVSSYGGHLRYELHSNPRRGDVFI
PMESRPDVILKGNQMSIMFLEGAYPSLGEAHQGRLQLVEGNFRHTETHNPVSREELMMVL
ANLEQLQIRALFSQLSSSVSLRRVVLEMATDTDTGIPASNVELCFCPANYQGDSCQECAP
GYYRDTKGLFLGKCIPCHCNGHSDQCLPGSGICLNCQHNTEGDHCERCKDGYMGSPSAQE
PLQCVGCPCPLSVASNNFAVGCVHKGSNMQCLCKPGYAGPNCERCAPGYYGNPLVIGSSC
QPCDCSGNTDPNMLFSSCDSLTGACSGCMHHTAGARCQLCAPGYYGDAVLAKNCTQCNCS
PCGTDSCHPQTGQCFCKTGVTGQHCDRCEEGYYGFEGCSGCRRCDCDVGAVGSSCHVQSG
QCSCLPGVSGSRCHQCAPGYWGFGQGGCTKCECRGGSCDPRSGECTCPNGLTGKQCDVCL
HEHEILVANGPDSIKCEVCDSCVLLLLEDLQSIEASFPSIRGQLVTLNASSIAWARLHGL
NGTI
Download sequence
Identical sequences H0ZBT3
59729.ENSTGUP00000008041 ENSTGUP00000008041 ENSTGUP00000008041

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.