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Domain assignment for J3SFE8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  J3SFE8
Domain Number 1 Region: 8-168
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 2.07e-58
Family Rap30/74 interaction domains 0.000000038
Further Details:      
 
Domain Number 2 Region: 446-517
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 4.9e-23
Family C-terminal domain of the rap74 subunit of TFIIF 0.0000475
Further Details:      
 
Weak hits

Sequence:  J3SFE8
Domain Number - Region: 171-268
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 0.00497
Family Rap30/74 interaction domains 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) J3SFE8
Sequence length 517
Comment (tr|J3SFE8|J3SFE8_CROAD) General transcription factor IIF subunit 1-like {ECO:0000313|EMBL:AFJ51651.1} OX=8729 OS=Crotalus adamanteus (Eastern diamondback rattlesnake). GN= OC=Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus.
Sequence
MTSLGTSNQGVTEYVVRVPKSTSKKYNIMAFNAADKVNFATWHQAKMERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFKLEDQPWILKVNGKAGRKFKGVKKGGVTE
NTSYYIFTQCPDGAFEAFPVNNWYNFTPMAKHRTLTAEEAEEEWERRNKVLNHFTIMQQR
RLKDQGEEEEEEKEKKGKKKGSDLKIHDLEDDLEMSSDDSEFSDTDGEKPAKTKKKAPPT
KKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSAGSSSSAEEAVGKPKVTKEDIPKGIDEAS
ESSEESEEEKPAEEKEEEEEEKKVPTPQDKKKKKDSSDESETSEDSDIDSEASSALFMTK
KKTPPKKERKGSASSSQGNSRPGTPLVDAGSTSSMLRAAANKLEQGKRQAGSSELPAAKR
LKMDAGAQAATTSGKSTPQPQSGKSTPSSGDVQLTEDAVRRYLTRKPMTTKDLLKKFQTK
KTGLSSEQTVNVLAQILKRLNPERKNINDKMHFFLKE
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Identical sequences J3SFE8

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