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Domain assignment for P36305 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  P36305
Domain Number 1 Region: 253-522
Classification Level Classification E-value
Superfamily VP4 membrane interaction domain 4.45e-124
Family VP4 membrane interaction domain 0.00000000024
Further Details:      
 
Domain Number 2 Region: 65-224
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.38e-71
Family vp4 sialic acid binding domain 0.00000026
Further Details:      
 
Weak hits

Sequence:  P36305
Domain Number - Region: 736-761
Classification Level Classification E-value
Superfamily Nuclear receptor coactivator interlocking domain 0.0471
Family Nuclear receptor coactivator interlocking domain 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) P36305
Sequence length 776
Comment (sp|P36305|VP4_ROTB5) Outer capsid protein VP5* OX=36440 OS=Rotavirus A (isolate RVA/Cow/Thailand/A5/1988/G8P6[1]) (RV-A). GN= OC=Rotavirus A. OH=9913
Sequence
MASLIYRQLLTNSYTVELSDEIQEIGSTKSQSVTINPGPFAQTSYAPVNWGPGETNDSTV
VEPVLDGPYQPTTFNPPVSYWMLLTPTDAGVEVEGTNNTNRWLATILIEPNVQSEERTYT
LFGQQVQITVSNDSQTKWKLVDVSKQTQDGNFSQHRQLLSTPKLYGVMKHGGKIYTYNGE
TPNANTGYYSTTNYDSVNMTAYCDFYIIPLAQEAKCTEYINNGLPPIQNTRNVVPVSISS
RSIVHTRAKANEDIIVSKTSLWKEMQYNRDIIIRFKFANSIVKSGGLGYKWSEVSFKPAN
YQYTYTRDGEEVTAHTTCSVNGVNDFNYNGGSLPTDFVISKYEVIKENSCVYIDYWDDSK
AFRNMVYVRSLAANLNSVMCPGGDYSFALPVGNYPVMTGGAVSLHSAGVTLSTQFTDFVS
LNSLRFRFRLSVEEPSFSIMRTRVSGLYGLPAAKPNNSQEYYEIAGRFSLISLVPSNDDY
QTPIMNSVTVRQDLERQLGELRDEFNNLSQQIAMSQLIDLALLPLDMFSMFSGIKSTIDA
AKSMATNVMKKFKKSNLANSVSTLTDSLSDAASSVSRSSSVRSLGSTASAWTEVSEVATE
VNELTNSISTQTSTISKRLRLKEMATQTDGMNFDDISAAVLKTKIDKSTQINANTLPDIV
TEASEKFIPNRTYRVIADDEVLEASTDGRFFAYKVETFEEVPFDVQKFADLVTDSPVISA
IIDFKTLKNLNDNYGINKQQALNLLRSDPKVLREFINQNNPIIRNRIENLIMQCRL
Download sequence
Identical sequences P36305
VP4_ROTB5

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