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Domain assignment for Q0ZCD2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q0ZCD2
Domain Number 1 Region: 245-394
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.24e-45
Family Retroviral integrase, catalytic domain 0.0026
Further Details:      
 
Domain Number 2 Region: 599-693
Classification Level Classification E-value
Superfamily MCP/YpsA-like 1.68e-22
Family MoCo carrier protein-like 0.0000911
Further Details:      
 
Weak hits

Sequence:  Q0ZCD2
Domain Number - Region: 219-259
Classification Level Classification E-value
Superfamily MAL13P1.257-like 0.0458
Family MAL13P1.257-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Q0ZCD2
Sequence length 694
Comment (tr|Q0ZCD2|Q0ZCD2_POPTR) Integrase {ECO:0000313|EMBL:ABG37656.1} OX=3694 OS=subsp. trichocarpa). GN= OC=Populus.
Sequence
MDQAKSVITLRSGKVIEKPILEPCEKDDELIFEGKERVESEHCKEKTDSLPPLPFPHAVT
KQRKVNHNSEIFETFKQVRINIPLLDAIKHVPSYAKFLKDLCTVKRKLNVKNKAFLAEQV
SVILQNNNTLKYKDPGCPTISSFIGEYKIERVLLDLGVSVNLLPYLVFQNLNLGQLPAHW
STLNKRKFLNEVKNFYWDDPYLFKYCPNQIFRKCIPDNETCENCQKLRSISKRHMMPLNP
ILVIEIFDCRGIDFMGPFPPSFGFLYILVAVDYVSKWIEAIPSRNKDHKTVIKFLKENIL
SRFGIPRAMISDGGTHFCNKSFEFLMKKYGITHKFATPYHPQTSGQVELANREIKQILEK
TMNPNRKDWSLRLNDALWAYQTAYKTSLGMSPYRLVYGKPCHLPVELEHKAYWAIKAFNS
NLDDASQLRKLQINELKEIRNDAYKNSRIHKGRIKEFHDKKILRKTFNVGQKVLLYNSRL
HLFPGKLRSRWSGPFIVKHVYPYGACDIKNPKNDNVFKYFPALPPNAIAKNYRAKCARLR
LLMNHGIPEDIRRLIEAKKRRAKRLKVCHRWTCNATCRSLGMIFVNCEDKIQFIKDGPRG
SQVLGVVPKALAKRDIIGKTIGEELQVPTMSDRLNAMFNHVDAFSALPGGLGTLEEIFYI
SSRAQLHIHHKLIGLLNVNGFYDNLLSFLDQAVE
Download sequence
Identical sequences Q0ZCD2

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