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Domain assignment for Q86228 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q86228
Domain Number 1 Region: 253-522
Classification Level Classification E-value
Superfamily VP4 membrane interaction domain 2.88e-126
Family VP4 membrane interaction domain 0.000000000194
Further Details:      
 
Domain Number 2 Region: 65-224
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.02e-72
Family vp4 sialic acid binding domain 0.000000129
Further Details:      
 
Weak hits

Sequence:  Q86228
Domain Number - Region: 591-711
Classification Level Classification E-value
Superfamily Clostridium neurotoxins, "coiled-coil" domain 0.0314
Family Clostridium neurotoxins, "coiled-coil" domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q86228
Sequence length 776
Comment (tr|Q86228|Q86228_9REOV) Outer capsid protein VP4 {ECO:0000256|RuleBase:RU004344, ECO:0000256|SAAS:SAAS00976480} OX=10922 OS=Simian rotavirus. GN= OC=Rotavirus A.
Sequence
MASLIYRQLLTNSYTVDLSDEIQEIGSTKSQNVTINPGPFAQTGYAPVNWGPGEINDSTT
VGPLLDGPYQPMTFNPPVDYWMLLAPTTPGVIVEGTNNTDRWLATILIEPNVQSENRTYT
IFGIQEQLTVSNTSQDQWKFIDVVKTTANGSIGQYGPLLSSPKLYAVMKHNEKLYTYEGQ
TPNARTAHYSTTNYDSVNMTAFCDFYIIPRSEESKCTEYINNGLPPIQNTRNVVPLSLTA
RDVIHYRAQANEDIVISKTSLWKEMQYNRDITIRFKFANTIIKSGGLGYKWSEISFKPAN
YQYTYTRDGEEVTAHTTCSVNGVNDFSFNGGYLPTDFVVSKFEVIKENSYVYIDYWDDSQ
AFRNVVYVRSLAANLNSVMCTGGSYNFSLPVGQWPVLTGGAVSLHSAGVTLSTQFTDFVS
LNSLRFRFRLAVEEPHFKLTRTRLDRLYGLPAADPNNGKEYYEIAGRFSLISLVPSNDDY
QTPIANSVTVRQDLERQLGELREEFNALSQEIAMSQLIDLALLPLDMFSMFSGIKSTIDA
AKSMATNVMKKFKKSGLANSVSTLTDSLSDAASSISRGSSIRSIGSSASAWTDVSTQITD
ISSSVSSVSTQTSTISRRLRLKEMATQTEGMNFDDISAAVLKTKIDKSTQISPNTIPDIV
TEASEKFIPNRAYRVINNDDVFEAGIDGKFFAYKVDTFEEIPFDVQKFADLVTDSPVISA
IIDFKTLKNLNDNYGITKQQAFNLLRSDPRVLREFINQDNPIIRNRIEQLIMQCRL
Download sequence
Identical sequences Q86228
Q86228_9REOV

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