SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A147ACL9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A147ACL9
Domain Number 1 Region: 541-587
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000222
Family TSP-1 type 1 repeat 0.00087
Further Details:      
 
Domain Number 2 Region: 117-152
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000309
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 3 Region: 57-104
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000497
Family TSP-1 type 1 repeat 0.0036
Further Details:      
 
Domain Number 4 Region: 495-533
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000201
Family EGF-type module 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A147ACL9
Sequence length 588
Comment (tr|A0A147ACL9|A0A147ACL9_FUNHE) Complement component C8 beta chain {ECO:0000313|EMBL:JAR76300.1} OX=8078 OS=Fundulus heteroclitus (Killifish) (Mummichog). GN= OC=Fundulus.
Sequence
MFSVMIQPGRVSSHSCLLTVALGLLLLSEFPQATASNGNSSVREARSVGGQVVVQPVDCV
LSEWSRWSRCDTCAKKRFRYAKLERPSQFGGELCYLNGRQEESCEVPDRYTCDNVPLCEG
FLCTQTGRCVHRTLQCNGEDDCGDMSDEAGCQRVSKPCREEAEEYWGIENLAKGINVLNS
QVEGVVLDNRYYGGGCLPHYIQDVPFRKPFNLQQYTLQTGGSYDFTLESFSSYSDYMEHI
LRERTSQTSFSFGFSVPGVFSLGFNYKDSKYKKFVSTIRRASGVENSFIQAKAELQLARY
ILKSDGLVLHPEFLQRLRSLPQAYVYGEYRQIYRDYGTHYITEATLGGDFQHTIILNKKK
LEKSDYTLDQYKSCVQVGFKIGVTIEGVPVSVGADAGSCGGLLKEMGEDTKNGATMEDFV
AVVRGGSSESITAFLSQKLPGPDLMRLWGEGVRFNPDFIRMTTKPLYELVTSRDFVQDAS
LKRNLKRALSEYLAETSSCRCTPCHNNGVAVLKGTRCACVCPSGYTGRSCEITHIQKELG
IDGSWSCWGQWSSCSGGRMSRSRQCNNPAPSNGGLSCTGPQQESTECF
Download sequence
Identical sequences A0A147ACL9
XP_012716438.1.37407

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]