SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A151MQH2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A151MQH2
Domain Number 1 Region: 122-365
Classification Level Classification E-value
Superfamily vWA-like 6.67e-76
Family Integrin A (or I) domain 0.000000786
Further Details:      
 
Domain Number 2 Region: 23-81
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000178
Family Plexin repeat 0.001
Further Details:      
 
Domain Number 3 Region: 479-519
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000001
Family Integrin beta EGF-like domains 0.0042
Further Details:      
 
Domain Number 4 Region: 436-474
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000131
Family Integrin beta EGF-like domains 0.034
Further Details:      
 
Domain Number 5 Region: 365-424
Classification Level Classification E-value
Superfamily Integrin domains 0.00000309
Family Integrin domains 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A151MQH2
Sequence length 674
Comment (tr|A0A151MQH2|A0A151MQH2_ALLMI) Integrin beta {ECO:0000256|RuleBase:RU000633} KW=Complete proteome; Reference proteome OX=8496 OS=Alligator mississippiensis (American alligator). GN=Y1Q_0019240 OC=Alligator.
Sequence
MAEDICSTCLITTRSLTTVTNMENKCATSNAGTCTKCLAVDPECGWCTQEDFMGEATQSR
RCDTVFNLIKKGCQSDFIENPMNSITTSSDHEANMQVTPGKVSIHLRPGGKTSFMLKIRP
LEKYPVDLYYLVDVSASMHNNIEKLNSVGFDLSKKMANISLDFRLGFGSYVDKTVSPYIS
THPGRIHNQCSDYNLDCMPPHGYIHVLSLTDNIADFKNAVNKQKISGNIDTPEGGFDAML
QAAVCQSHIGWRKEAKRLLLVMTDQTSHLALDSKLGGIVIPNDGNCHLKDNIYIKATSME
HPSLGQLSEKLIDNNINVIFAVQGHQFDWYKDLLPLLPGTVAKQIESQAANLNDLVIEAY
RKLISEVKIQVDNQLKDLYFNITAICPDGSRNTGMEGCKNVRYDEEVLFNVSIAMKGCTT
TGGQNKLGKVYGKYCEMDNFSCPYHHGILCAGNGECEAGKCKCFNGWEGEHCQCSSSAKH
CINSKGQICSGRGHCVCGKCECTDPRSFGRLCEYCPNCNNACDENWSCVHCHHSNNVSQI
ILDQCKTSCTYMMQYSDKTSECFSDPNYFRIFIIILIVTFLIGLLNVLIIRQIILQWNNN
KIKSPADYRVSSTKKMPMTRKSLAVQALQRGRKPKLQSLKPEDERGPDFNCFFDNSDICS
KEKNLGNAVLLLWV
Download sequence
Identical sequences A0A151MQH2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]