SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1L5YK75 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1L5YK75
Domain Number 1 Region: 43-253
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 4.19e-119
Family Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 0.0000000166
Further Details:      
 
Domain Number 2 Region: 1-42
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase subunits 1.06e-17
Family Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 0.00048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1L5YK75
Sequence length 253
Comment (tr|A0A1L5YK75|A0A1L5YK75_9EURY) Methyl coenzyme M reductase subunit A {ECO:0000313|EMBL:APP91529.1} OX=1131255 OS=uncultured Methanocellales archaeon. GN=mcrA OC=environmental samples.
Sequence
AMQIGMSFIDAYKMCAGDAAVADLAFAAKHAALIEMANLLPARRARGPNEPGGLSFGFLC
DMVQTSRKYPDDPVKSTLEVVGAGCMLYDQIWLGSYMSGGVGFTQYATAAYTDDILDDFT
YYGYDYIKGKYGVAKAKATMDVVNDVGTEVTLYGIEQYEKYPTTLEDHFGGSQRATVLSA
AAGSVTAMATGNANAGLSAWYLSMYLHKEAWGRLGFFDYDLQDQCGATNVFSCRSDEGAI
DELRGPNYPNYAM
Download sequence
Identical sequences A0A1L5YK75

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]