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Domain assignment for A0A1S3GDB8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1S3GDB8
Domain Number 1 Region: 48-137
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.15e-37
Family SCAN domain 0.0000532
Further Details:      
 
Domain Number 2 Region: 357-414
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.98e-26
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 3 Region: 403-455
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.42e-19
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 4 Region: 485-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.92e-18
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 5 Region: 319-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.04e-16
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 6 Region: 216-264
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000445
Family KRAB domain (Kruppel-associated box) 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1S3GDB8
Sequence length 543
Comment (tr|A0A1S3GDB8|A0A1S3GDB8_DIPOR) zinc finger protein with KRAB and SCAN domains 4-like isoform X1 {ECO:0000313|RefSeq:XP_012886695.1} KW=Complete proteome; Reference proteome OX=10020 OS=Dipodomys ordii (Ord's kangaroo rat). GN=LOC105996978 OC=Heteromyidae; Dipodomyinae; Dipodomys.
Sequence
MAGEPGRHTALDAHSSEDQMELLTVKVEKEEFSALAADSGTPCSRVRGPECSRQRFRAFG
YPETAGPREALSQLRELCRQWLRPDLRSKEQILELLVLEQFLTILPGDLQGWVREQHPES
GEEVVLLLEYLERQLDEPLPQVLTGDLRQEPLCCKVALLTPAGRSQSSQLQPMRTLFKHE
SLGLQPLEERVPQVPGLAQRGSYREDATGVSRSTLQAQGLLKMEDVALSLSSGWMWQDSS
QMNLLRDARQENCGSLVSQGQEMQIKTSVETAVREYSEQERRQIPRCEGEDIPQAPPDAK
AGEHESKLQRKQKSATENRRHHCCDCGKSFAQSSGLSKHRRIHTGEKPYECEDCGKTFIG
SSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSL
LEHHKIHTGEKPYPCTMCGKAFRRNSHLLRHQRIHTGARHVREPDWEGEGRLEGQWENTE
TPVSYKCSECERSFTRNRSLIEHLKIHTGEKPYQCDTCGKGFTRTSYLAQHQRSHVGKKL
LSQ
Download sequence
Identical sequences A0A1S3GDB8
XP_012886695.1.60039

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