SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1S3Q6B1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1S3Q6B1
Domain Number 1 Region: 465-671
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.7e-38
Family Laminin G-like module 0.001
Further Details:      
 
Domain Number 2 Region: 683-874
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.69e-37
Family Laminin G-like module 0.0057
Further Details:      
 
Domain Number 3 Region: 878-1058
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.3e-35
Family Laminin G-like module 0.0014
Further Details:      
 
Domain Number 4 Region: 281-448
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.14e-33
Family Laminin G-like module 0.0028
Further Details:      
 
Domain Number 5 Region: 1091-1274
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.92e-33
Family Laminin G-like module 0.000000733
Further Details:      
 
Domain Number 6 Region: 26-195
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.57e-30
Family Laminin G-like module 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1S3Q6B1
Sequence length 1477
Comment (tr|A0A1S3Q6B1|A0A1S3Q6B1_SALSA) neurexin-1-beta isoform X12 {ECO:0000313|RefSeq:XP_014035518.1} KW=Complete proteome; Reference proteome OX=8030 OS=Salmo salar (Atlantic salmon). GN=nrxn1 OC=Salmoniformes; Salmonidae; Salmoninae; Salmo.
Sequence
MVLAMRHGAHLIWVGLLLCCMVDIGATMEFTGAEGQWARFPMWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLIHNGKLSLRFSIFCAEPATVLTNTAVNDSQWHAVTIWRNFK
NTTLMVDNEVKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSAVVKDHVPFTGWIT
DIKVNNTESALLNSAGVINDLCGAAANMCLNGGVCNVINDEPTCDCSQTDYQGKDCSEED
NHVEGLAHLMMGDQGKSKGRREGEGWLRRSLLSIPGKEDFVATFKGSEFFCYDLSLNPIQ
SSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKF
NDNDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPST
ADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRMAKQGDAKMKVHGIVAFKCENVATLDPI
TFETPGSFITLNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQAPKDSKSPLTLKVDFF
AIEMLDGHLYLLLDMGSGTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISINTQRQAYTAP
GESEILDLDDNLYLGGLPENKLGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRMAE
VQKAAGVKPSCSKEPPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCERDATILSY
DGSKFMKIQLPVVMHTEAEDVSLRFRSQRAYGVLMATTSRDSADTLRLELETGRVRLTVN
LDCIKINCTTSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLQPVEGQMAGDHTQ
LEFHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKN
IIADPVTFKSRSSYLALTTLQAYYSMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGY
LHYVSDLGNGAHLIKGNSNKPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLD
LKGDLYIGGVAKETYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALACVGQIERGCE
GPSTTCQEDSCANQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGLITYTWPP
NDRPSTRADRLAIGFSTQLKDAVLVRVDSSSGLGDYLKLHIEKGNIAVIFNVGTDDINIE
ETAKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGRQLTIFNSQTTIQIGGWDRDR
SRPFQGQLSGLYYNGLKVFNMATEGDRNIRIQGSVRLVGESPSSITPQSSANTANRSETS
TSIMEITTTTASSRRVKQTTPREPQQTTDDLLVASAECPSDDEDIDPCEPSSGGLANPTG
PAVKGYPGPSEGVFRESSSTTGMVVGIIAAAALCILILLYAMYKYRNRDEGSYHVDESRN
YISNTSQSNGTVVKEKPPNAAKTSSKSKKNKDKEYYV
Download sequence
Identical sequences A0A1S3Q6B1
XP_014035518.1.97760

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]