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Domain assignment for A2C412 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A2C412
Domain Number 1 Region: 300-496
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 7.09e-47
Family Ribonuclease PH domain 1-like 0.0000123
Further Details:      
 
Domain Number 2 Region: 5-142
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.42e-44
Family Ribonuclease PH domain 1-like 0.000025
Further Details:      
 
Domain Number 3 Region: 143-226
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.67e-27
Family Ribonuclease PH domain 2-like 0.0021
Further Details:      
 
Domain Number 4 Region: 459-557
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 7.98e-26
Family Ribonuclease PH domain 2-like 0.00012
Further Details:      
 
Domain Number 5 Region: 616-702
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.4e-19
Family Cold shock DNA-binding domain-like 0.00065
Further Details:      
 
Domain Number 6 Region: 227-333
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 1.7e-17
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0022
Further Details:      
 
Domain Number 7 Region: 557-628
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000000266
Family Eukaryotic type KH-domain (KH-domain type I) 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A2C412
Sequence length 722
Comment (sp|A2C412|PNP_PROM1) Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595} KW=Complete proteome OX=167555 OS=Prochlorococcus marinus (strain NATL1A). GN=NATL1_16651; OC=Prochlorococcus.
Sequence
MQGQTKSVSFDGREIKLTTGRFAPQAGGSVMIECGDTSVLVTATKSSGREGVDFLPLMCD
YEERLYAAGRIPGSFMRREGRPPERATLISRLIDRPMRPLFPGWMRDDIQIVATCLSLDE
RVPADVLAVTGASMATLMAGIPFQGPMAAVRVGLLGDDFVLNPSYREIERGDLDLVVAGT
PDGVVMVEAGANQLSEQDVIEAIDFGYEAITELINAQKEVLKESGIKQEMPKAPEIDDTI
STYLDKNCTKSISEVLKNFDQTKEERDNKIEEIKISISAKIDGLKDDNAVKKSLSLNNKL
LENSYKALTKKLMREQIIKEGKRVDGRELNEVRAIEADAAVLPNRVHGSALFQRGLTQVL
STATLGTPSDAQEMDDLNPNTDKTYIHHYNFPPYSVGETRPMRTPGRREVGHGALAERAL
IPVLPAKDTFPYVLRVVSEVLSSNGSTSMASVCGSTLALMDAGVPLKAPVGGAAMGLIKE
GKEVRILTDIQGIEDFLGDMDFKVAGTEKGITALQMDMKITGLPIETIGEAINQALPART
HILGKMLDAIETPKDNLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
GGIVTIASHDGAAAEEAQRIIEGLTRKVHEGEIFPGSITRIIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDQVTVRVREIDNRGRINLTLRGVSQNGGMSNYPEPTPTPVAP
LT
Download sequence
Identical sequences A2C412
gi|124026371|ref|YP_001015487.1| WP_011824227.1.44141 167555.NATL1_16651

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