SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A5JVA0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A5JVA0
Domain Number 1 Region: 487-795
Classification Level Classification E-value
Superfamily L domain-like 1.81e-46
Family Ngr ectodomain-like 0.015
Further Details:      
 
Domain Number 2 Region: 49-256,298-435
Classification Level Classification E-value
Superfamily RNI-like 1.41e-38
Family Cyclin A/CDK2-associated p19, Skp2 0.061
Further Details:      
 
Domain Number 3 Region: 883-1039
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 2.75e-34
Family Toll/Interleukin receptor TIR domain 0.0000603
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A5JVA0
Sequence length 1050
Comment (tr|A5JVA0|A5JVA0_PIG) Toll-like receptor 7 {ECO:0000313|EMBL:ABQ52583.1} KW=Complete proteome; Reference proteome OX=9823 OS=Sus scrofa (Pig). GN=TLR7 OC=Sus.
Sequence
MVFPVWTLKRQFLILFNIVLISELLGARWFPKTLPCDVSLDAPNAHVIVDCTDKHLTAIP
GGIPTNATNLTLTINHIASITPASFQQLDHLVEIDFRCNCIPVRLGPKDNLCTRRLQIKP
SSFSKLTYLKALYLDGNQLLEIPRDLPPSLQLLSLEANNIFWIMKENLTELANLEMLYLG
QNCYYRNPCNVSFSIEKDAFLSLRNLKLLSLKDNNISAVPTVLPSTLTELFLYNNIIAKI
QEDDFNNLSQLQVLDLSGNCPRCYNVPFPCTPCENNAPLQIHLHAFDALTELQVLRLHSN
SLQYVPQRWFQNLNKLKELDLSQNFLAKEIGDAKFLHLLPNLVKLDLSFNYELQVYHTFM
NLSDSFSSLKNLKVLRIKGYVFKELKSLNLSPLRNLPNLEVLDLGTNFIKIANLSIFKQF
KTLKFIDLSVNKISPSGDSSESGFCSGMRTSAESHGPQVLESLHYFRYDEYARSCRFKNK
EPSSSLPLNEDCSMYGQTLDLSRNNIFFIRSSEFQHLTFLKCLNLSGNSISQALNGSEFQ
PLVELKYLDFSNNRLDLLHSTAFEELRNLEVLDISSNSHYFQSEGITHMLDFTKNLKVLK
KLMMNNNDIATSTSTTMESESLRILEFRGNHLDILWRDGDNRYLKFFKNLHKLEELDISE
NSLSFLPSGVFDGMPPNLKTLSLAKNGLKSFNWGKLQYLQNLETLDLSYNQLKTVPERLS
NCSRSLKKLILKNNEIRNLTKYFLQDAFQLRHLDLSSNKIQVIQKTSFPENVLNNLQILF
LHHNRFLCNCDAVWLVWWVNHTEVTIPFLATDVTCMGPGAHKGQSVVSLDLYTCELDLTN
FVLFSLSLSAVLFLIVITIANHLYFWDVWYSYHFCKAKIKGYQRLISPNSCYDAFIVYDT
KDPAVTEWVLDELVAKLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSKKTVFVMTD
KYAKTEKFKIAFYLSHQRLMDEKVDVIILIFLEKPLQKSKFFQLRKRLCGSSVLEWPTNP
QAHPYFWQCLKNALATDNHVTYSQVFKETA
Download sequence
Identical sequences A3RLM8 A5JVA0
ENSSSCP00000012898 ENSSSCP00000012898 ENSSSCP00000028903

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]