SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for B2J8U1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  B2J8U1
Domain Number 1 Region: 243-388
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 5.43e-39
Family Pentapeptide repeats 0.0002
Further Details:      
 
Weak hits

Sequence:  B2J8U1
Domain Number - Region: 37-65,114-164
Classification Level Classification E-value
Superfamily ARM repeat 0.0245
Family PBS lyase HEAT-like repeat 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) B2J8U1
Sequence length 413
Comment (tr|B2J8U1|B2J8U1_NOSP7) Pentapeptide repeat protein {ECO:0000313|EMBL:ACC82579.1} KW=Complete proteome; Reference proteome OX=63737 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102). GN=Npun_R4204 OC=Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.
Sequence
MKTYNMSFIKTNGLTILLVFISVIFIFSLTLIFSLFENIQGLSNQDKIEYINQALTTIAI
IIGGLALIINAYYTSRLSLDENQSLLMQILAGTLAWDNDIVTGINYKQPTPQEIVPERFS
KAIEQLGNEKIETRFAAIYALERIAKDSPKDHWTIMEILAAFIRENAPVNQKYEDELQVS
SKLPTDIQTAITVIGRRDSHKDPVNQKLDLRNTDLSNADLTEANLSKAIFVGANLQWVNF
TQANLSEADLSITNLCGSVFYEANLSKATLPEANLQGVILRKANLSKAIFYDANLEGAIL
CDANLVGAILCDANLEGAILCDANLFEANFEGSNLQDANLIGSNLQNAKLAGANLEGVLL
STANLQDANLQETNLFRANLSGCENLELQQIEQAFGDRTTILPENLNIPQHWR
Download sequence
Identical sequences B2J8U1
gi|186684326|ref|YP_001867522.1| 63737.Npun_R4204

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]