SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for E1BDF3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  E1BDF3
Domain Number 1 Region: 303-529
Classification Level Classification E-value
Superfamily vWA-like 2.97e-60
Family Integrin A (or I) domain 0.00029
Further Details:      
 
Domain Number 2 Region: 9-217
Classification Level Classification E-value
Superfamily vWA-like 9.32e-56
Family Integrin A (or I) domain 0.00029
Further Details:      
 
Domain Number 3 Region: 221-266
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000099
Family EGF-type module 0.017
Further Details:      
 
Domain Number 4 Region: 256-310
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000142
Family EGF-type module 0.018
Further Details:      
 
Domain Number 5 Region: 539-580
Classification Level Classification E-value
Superfamily Chicken cartilage matrix protein 0.00000301
Family Chicken cartilage matrix protein 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) E1BDF3
Sequence length 584
Comment (tr|E1BDF3|E1BDF3_BOVIN) Matrilin 4 {ECO:0000313|Ensembl:ENSBTAP00000014986} KW=Complete proteome; Reference proteome OX=9913 OS=Bos taurus (Bovine). GN=MATN4 OC=Pecora; Bovidae; Bovinae; Bos.
Sequence
MRGLLYSLLPLLLLLLQPWETQLQLAGPRCSSGPLDLVFVIDSSRSVRPFEFETMRQFLV
GLLRSLDVGPNATRVGVIQYSSQVQSVFPLRAFSRREDMERAIRAVVPLAQGTMTGLAIQ
YAMNVAFSVAEGARPPEAHVPRVAVIVTDGRPQDRVAEVAAQARARGIEIYAVGVQRADV
GSLRAMASPPLNEHVFLVESFDLIQEFGRQFQGRLCTLDLCTEGDHGCEHQCVSMPGSYF
CRCQAGFVLQQEQRSCRAIDHCSFGNHSCQHDCVSIYGGPQCRCREGYDLLPDGRSCQAR
DLCNGVDHGCEFQCVSEGFSYRCVCPEGRQLQADGKSCSRCREGHVDLVLLVDGSKSVRP
QNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYM
ERGTMTGLALRHMVEHSFSEAQGARPRALNVPRVGLVFTDGRSQDNISVWAARAKEEGIV
MYAVGVGKAVEEELREIASEPAELHVSYSPDFSTMTHLLENLKGSICPEEGIGAGTELRS
PCECESLVEFQGRTLGALESFLNLPLAQLTARLEDLENQLATQK
Download sequence
Identical sequences E1BDF3
ENSBTAP00000014986 ENSBTAP00000014986

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]