SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for E2RQ78 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  E2RQ78
Domain Number 1 Region: 393-580
Classification Level Classification E-value
Superfamily Cyclin-like 5.78e-69
Family Retinoblastoma tumor suppressor domains 0.0000182
Further Details:      
 
Domain Number 2 Region: 787-884,923-968
Classification Level Classification E-value
Superfamily Cyclin-like 1.46e-46
Family Retinoblastoma tumor suppressor domains 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) E2RQ78
Sequence length 1068
Comment (tr|E2RQ78|E2RQ78_CANLF) RB transcriptional corepressor like 1 {ECO:0000313|Ensembl:ENSCAFP00000012808} KW=Complete proteome; Reference proteome OX=9615 OS=Canis lupus familiaris (Dog) (Canis familiaris). GN=RBL1 OC=Canis.
Sequence
MFEDDPHAEGAAVVAAAGEALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLA
CSLYVACRKSIIPTVGKGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRE
RVERLERNFEVSTVIFKKFEPIFLDIFQNPYEEQPKFPRSRKQRRIPCSVKDLFNFCWTL
FVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIICPNRRDLLNPTFKGLPSDFHTADFK
ASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKVLKGECLLDLSSFTDNSK
AVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLGKLTAQANVDCSLQQHFE
KKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCI
RNPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQET
RRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLNLRPFYFYKVIEVV
IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANKVPTCEEVIFPNNFETG
NGGNVQGHLPMMPMSPLMHPRVKEVRTDSGSLRRVIFNISFLNCHERYSSPTAGSAKRRL
FGEDPPKEMLVDRIITEGTKLKIAPSSSITAENISISPGQSLLTMATAIVTGTTGHKVTI
PLHGIANDAGEITLIPISMNTAQESKVESPISLTAQSLIGASPKQTHLTKAQEAHPTGIS
KPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHL
DQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNING
DFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEA
PPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFNGSPSKSLKDINNM
IRQGEQRTKKRAITIDGDAESPAKRLCQENDDVLLKRLQDVVSERANH
Download sequence
Identical sequences E2RQ78
ENSCAFP00000012808 ENSCAFP00000012814

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]