SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for E3E965 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  E3E965
Domain Number 1 Region: 124-203
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.0000000549
Family Invasin/intimin cell-adhesion fragments 0.0075
Further Details:      
 
Domain Number 2 Region: 238-289
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.000000824
Family Invasin/intimin cell-adhesion fragments 0.0086
Further Details:      
 
Domain Number 3 Region: 494-543
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.0000487
Family Invasin/intimin cell-adhesion fragments 0.012
Further Details:      
 
Domain Number 4 Region: 52-118
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.0000942
Family Invasin/intimin cell-adhesion fragments 0.011
Further Details:      
 
Weak hits

Sequence:  E3E965
Domain Number - Region: 548-626
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.000149
Family Invasin/intimin cell-adhesion fragments 0.0078
Further Details:      
 
Domain Number - Region: 292-374
Classification Level Classification E-value
Superfamily Invasin/intimin cell-adhesion fragments 0.00863
Family Invasin/intimin cell-adhesion fragments 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) E3E965
Sequence length 628
Comment (tr|E3E965|E3E965_PAEPS) Tenascin-N {ECO:0000313|EMBL:ADO57338.1} KW=Complete proteome; Reference proteome OX=886882 OS=Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa). GN=PPSC2_15825 OC=Paenibacillus.
Sequence
MERMKRMSKRSTFLLALLMFVFAAWPAGLIRAEEKTTSTVQWDSQNPTTVNLGGSPAQLK
VWSVTQTGKTDVTERAEWISGDSSILKVEKGLITPVSKGQIKIVATYDQKTVSTTITVKS
PYSKLQFNPTGPLNLTIGGESKQLTAQGVLSGGGTENVSGVEWTSTNEAVATVENGLVRP
LAKGVTYIKATKDGLNAQLIVYVRSSSQALVLSASGSKSVYLGSSPFQVTATDVNLTGGK
TDVTSTAEWTSSNSLVATVEQGKITPMDVGNSTITASYHGLSKTLKINVLPTVEKLVSSK
ASLTLETGSKTSLPSISAYLVNGAKKAVQSDVKWSLSSESAVKIVNGKLVAVNPGSATLT
ATVGALKLDIPVTVQYKVLKLTASEKKYVLVAGQETSIPTVKAHMAGGGVLDVTNQVSWV
ATTAAVTVGNGKVKAVSGGNSGIKAMYMNKYVKVPVIVEGAISTLTPSFSNAEMNLKGSK
SIKVVGNYTDGKKVTLSSKVKWTTSNASVVVVKGSSIKAVGIGTATITGTYQDKSFNVEI
KVTPKLLKLVLSNKNLKLPKGSSQVLSVSAVYDSGATANVTNSAVWTSSKPSIVQVTAGQ
VKALDSGSSSIKVVYGGKKVTTSAKVLK
Download sequence
Identical sequences E3E965
gi|386041897|ref|YP_005960851.1| gi|310642821|ref|YP_003947579.1| WP_013371924.1.14980 WP_013371924.1.91857

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]