SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F1QPB3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F1QPB3
Domain Number 1 Region: 75-108
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000408
Family PHD domain 0.027
Further Details:      
 
Weak hits

Sequence:  F1QPB3
Domain Number - Region: 274-325
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0113
Family PHD domain 0.032
Further Details:      
 
Domain Number - Region: 79-91,194-230
Classification Level Classification E-value
Superfamily Multiheme cytochromes 0.0159
Family Cytochrome c3-like 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F1QPB3
Sequence length 363
Comment (tr|F1QPB3|F1QPB3_DANRE) PHD finger protein 6 {ECO:0000313|Ensembl:ENSDARP00000023828} KW=Complete proteome; Reference proteome OX=7955 OS=Danio rerio (Zebrafish) (Brachydanio rerio). GN=phf6 OC=Cyprinidae; Danio.
Sequence
MSGQRKGASARLRKCAFCRTNRDKECGQLLVAESHRVAAHHKCMLFSSALVTSHSDSENI
GGFSIEDVKKEIKRGNKLMCTSCHRPGATIGCDVKTCRRTYHYYCALWDKAQTKENPSQG
IYLVYCRKHRDASQDGSDDEQGVAANDSDSSPPRSRGRGRFEKSRIRGVSRGQSDDTRST
SSQGNDDTESSSHRDRSPLRGSPGDSGLRCGFCHAGEEENETRGVLHSDNAKKVAAHYKC
MLFSSGTVQLTTSSRAEFGNFDIKTVIQEIKRGKRMKCTLCAQLGATIGCEIKACVKTYH
YHCGLQDKAKYIENMARGIYKLYCKNHSGNEERDEEDEERESRSREKAAIDNRADPPSQV
NGN
Download sequence
Identical sequences F1QPB3
ENSDARP00000023828 7955.ENSDARP00000023828 ENSDARP00000023828

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]