SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F1R336 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F1R336
Domain Number 1 Region: 325-406
Classification Level Classification E-value
Superfamily HMG-box 3.01e-21
Family HMG-box 0.00000625
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F1R336
Sequence length 550
Comment (tr|F1R336|F1R336_DANRE) Transcription factor 7-like 1-B {ECO:0000313|Ensembl:ENSDARP00000051824} KW=Complete proteome; Reference proteome OX=7955 OS=Danio rerio (Zebrafish) (Brachydanio rerio). GN=tcf7l1b OC=Cyprinidae; Danio.
Sequence
MPQLNGGGGDELGANDEMISFKDEGEQEDKISENVSAERDLDDVKSSLVNESENNSSSSD
SEQTERRPQPRADLESYEKAREYFTEALRRQQDGCFFKSPHYPGYPFLMIPDLANPYLSN
GALSPSARTYLQMKWPLLDVPGSAALKDSQSPSPGHLSNKVPVVQHAHMHPLTPLITYSN
EFPPGTPPAHLSPEILDPKTGIPRTPHPAELSPYYPLSPGAVGQIPHPLGWLVPQQGQHM
YPITAGGFRHPYPALAMNASMSSLVSSRFSPHLVPHHPHGLHQTGIPHPAIVSPVIKQEP
NGELSPPVNTKSPGPNKKDEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQIL
GRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRDNKTDSTPEDFSM
RSKKPCVQYLPQEKMIDSPGSSHGSMLDSPATPSAALASPAAPAATHSEQAQPLSLTTKP
ERFPLLSKPPPSSSSSSSSSSSGLPTPPLLSRPLPFALLTPPSPFHQAALHSHHALFQSQ
PLSLVTKSSD
Download sequence
Identical sequences F1R336
7955.ENSDARP00000051824 ENSDARP00000051824 ENSDARP00000051824 NP_571371.2.45394

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]