SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F5B568 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F5B568
Domain Number 1 Region: 318-425
Classification Level Classification E-value
Superfamily Virus ectodomain 2.45e-31
Family Virus ectodomain 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F5B568
Sequence length 504
Comment (tr|F5B568|F5B568_ALV) Envelope glycoprotein {ECO:0000313|EMBL:AED99823.1} OX=11864 OS=Avian leukosis virus (ALV). GN=env OC=Alpharetrovirus. OH=9031
Sequence
GVHLLQQPGNVWVTWANKTGQTDFCLSLQSATSPFRTCLIGIPQYPLSAFKGYVTNVTAC
QNDTDLASQTACLIQTLNTTLPWDPQELDILGSQMIKNGTNRTCVTFGSVCYENNGSRVC
HIFDGNFNGTGGAEAELRDFITKWKGDDHLIRPYVNQSWTMVSPINTESFSISSRYCGFT
SNETRYYRGNLSDWCNSKGGEWSAGYSNGTQCSSNTTDCDGNCTAEWNYYAYGFTFGNKP
EVLWNNGTAKALPPGIFLICGDRAWQGIPSNALGGPCYLGQLTMLSPNFTTWMTYGPNIT
GHHRNRRSVSHLSSDCSDEVQLWSATARIFASFFAPGVAAAQALREIERLACWSVKQANL
TSLVLNAMLEDMNSIRHAVLQNRAAIDFLLLAQGHGCQDVEGMCCFNLSDHSESIHKALQ
AMKEHTEKIRVEDDPIGDWFTRTFGSFGGWLAKGVKTLLFALLVIVCLLAIIPCIIKCFQ
DCLSRTMYQFMDERIRYHRIREQL
Download sequence
Identical sequences F5B568

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]