SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F6RU24 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F6RU24
Domain Number 1 Region: 106-310
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 4.71e-53
Family DBL homology domain (DH-domain) 0.00000000672
Further Details:      
 
Domain Number 2 Region: 315-477
Classification Level Classification E-value
Superfamily PH domain-like 2.03e-33
Family Pleckstrin-homology domain (PH domain) 0.0038
Further Details:      
 
Domain Number 3 Region: 601-702,751-777
Classification Level Classification E-value
Superfamily SH2 domain 7.15e-26
Family SH2 domain 0.00061
Further Details:      
 
Domain Number 4 Region: 1-68
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 0.0000000000000196
Family Calponin-homology domain, CH-domain 0.0046
Further Details:      
 
Domain Number 5 Region: 511-579
Classification Level Classification E-value
Superfamily SH3-domain 0.00000000000354
Family SH3-domain 0.0000266
Further Details:      
 
Domain Number 6 Region: 717-765
Classification Level Classification E-value
Superfamily SH3-domain 0.00000000212
Family SH3-domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) F6RU24
Sequence length 785
Comment (tr|F6RU24|F6RU24_CALJA) Vav guanine nucleotide exchange factor 1 {ECO:0000313|Ensembl:ENSCJAP00000030042} KW=Complete proteome; Reference proteome OX=9483 OS=Callithrix jacchus (White-tufted-ear marmoset). GN=VAV1 OC=Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix.
Sequence
MSQFLCLKNIRTFLSTCCEKFGLKRSELFEAFDLFDVQDFGKVIYTLSALSWTQIAQNRG
IVPFPTEEESVGDEDIYSGLSDQIDDTVEEDEDLYDCVENEEAEGDEIYEDLMRSEPVCM
PPKMTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFMKPLQRFLKAQDIEIIFINIEDLLR
VHTHFLKEMKEALATPGAANLYQVFIKYKERFLVYGRYCSQVESASKHLDHVAAAREDVQ
MKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQEAMEKDNLRLALDAMRD
LAQCVNEVKRDNETLRQITNFQLSIENLDQSLAHYGRPKIDGELKITSVERRSKMDRYAF
LLDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELF
FKTRELKKKWMEQFEMSISNIYPENATANGHDFQMFSFEETTSCKACQMLLRGTFYQGYR
CHRCRAPAHKECLGRVPPCGRHGQGTSGREAGSRLPKMEVFQEYYGLPPPPGAIGPFLRL
NPGDIVELTKAEAEQNWWEGRNTSTNEIGWFPCNRVKPYVHPCSSCPAVGFDVVEGPPQD
LSAYLWYAGPMERAGAESILTNRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEG
LYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTVSKPLCSLSTVGS
TKYFGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEIYGRVGWFPANYVEED
YSEYC
Download sequence
Identical sequences F6RU24
ENSCJAP00000030042

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]