SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F6YLU1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F6YLU1
Domain Number 1 Region: 6-157
Classification Level Classification E-value
Superfamily TRADD, N-terminal domain 2.09e-53
Family TRADD, N-terminal domain 0.0000291
Further Details:      
 
Domain Number 2 Region: 204-299
Classification Level Classification E-value
Superfamily DEATH domain 1.74e-17
Family DEATH domain, DD 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F6YLU1
Sequence length 303
Comment (tr|F6YLU1|F6YLU1_XENTR) TNFRSF1A associated via death domain {ECO:0000313|Ensembl:ENSXETP00000061042} KW=Complete proteome; Reference proteome OX=8364 OS=Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). GN=tradd OC=Silurana.
Sequence
MAAGSSMWVGSVYLYIKSDEVSLPRKYTDQKALIYEALRSAISESTGGCRDSIEILKIHS
SDQQLILYLKFCGLEPCQIFLKDYKERKLQMQIQNKLENCFSVAQLPIFTELKIDTGEMD
SLLEKEEQCLKYISQMKPTIQKDDEFAEIDERLKSLKLVPPSALDSDLSSQNSSQCSLPL
SLHSNRNSHIEGSTFYFQGEEFVDRPLTSTHIQHFAKSVGRNWKLVGRSLGKTCRALNDT
AIENLAYEFDREGRYEQAYQLLRLFKDSEGKKATVQRLVQALEENGLNSIAFDLLSLNEN
GLE
Download sequence
Identical sequences F6YLU1
gi|301615521|gb|XP_002937214| ENSXETP00000061042 XP_002937214.1.99540 XP_004913591.1.99540 XP_012817698.1.99540 XP_012817699.1.99540 ENSXETP00000061042

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]