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Domain assignment for F7HWH3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F7HWH3
Domain Number 1 Region: 187-253
Classification Level Classification E-value
Superfamily Homeodomain-like 1.58e-19
Family Homeodomain 0.0032
Further Details:      
 
Domain Number 2 Region: 61-125
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000000000218
Family LIM domain 0.01
Further Details:      
 
Domain Number 3 Region: 32-59
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000153
Family LIM domain 0.018
Further Details:      
 
Weak hits

Sequence:  F7HWH3
Domain Number - Region: 122-150
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.057
Family LIM domain 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) F7HWH3
Sequence length 382
Comment (tr|F7HWH3|F7HWH3_CALJA) LIM homeobox transcription factor 1 alpha {ECO:0000313|Ensembl:ENSCJAP00000008539} KW=Complete proteome; Reference proteome OX=9483 OS=Callithrix jacchus (White-tufted-ear marmoset). GN=LMX1A OC=Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix.
Sequence
MLDGLKMEENFQSAIDTSASFSSLLGRAVSPKSVCEGCQRVILDRFLLRLNDSFWHEQCV
QCASCKEPLETTCFYRDKKLYCKYDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCF
CCCVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHG
AGKGTAEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ
VWFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGGGSAGMEGIMNPYTALPTPQQLL
AIEQSVYSSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLATSEAGP
LQSRVGNPIDHLYSMQNSYFTS
Download sequence
Identical sequences A0A096NWR5 A0A2J8SL32 A0A2K5JUA3 A0A2K5KHP5 A0A2K5Q8W3 A0A2K5ZET9 A0A2K6BHU9 A0A2K6L2Q3 A0A2K6NQS3 F7B132 F7HWH3 G3QL82 G7NU26 H2Q0I2 Q8TE12
9544.ENSMMUP00000008291 9598.ENSPTRP00000002699 9606.ENSP00000294816 ENSPANP00000017497 ENSPTRP00000002699 NP_001167540.1.87134 NP_001167540.1.92137 NP_796372.1.87134 NP_796372.1.92137 XP_003824628.1.60992 XP_003824629.1.60992 XP_004027869.1.27298 XP_004027870.1.27298 XP_007987892.1.81039 XP_007987893.1.81039 XP_007987894.1.81039 XP_008983361.1.60252 XP_010371663.1.97406 XP_010371664.1.97406 XP_011758648.1.29376 XP_011758649.1.29376 XP_011788743.1.43180 XP_011788744.1.43180 XP_011853520.1.47321 XP_011853521.1.47321 XP_011942773.1.92194 XP_011942774.1.92194 XP_014981045.1.72884 XP_015300036.1.63531 XP_017741910.1.44346 ENSP00000294816 ENSP00000340226 ENSP00000356868 ENSPTRP00000002699 ENSP00000294816 ENSMMUP00000008291 ENSGGOP00000003228 ENSGGOP00000003228 ENSCJAP00000008539 ENSP00000294816 ENSP00000340226 ENSP00000356868 ENSCJAP00000008539 gi|28893581|ref|NP_796372.1| gi|291327513|ref|NP_001167540.1| ENSMMUP00000008291 ENSMMUP00000037754

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