SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G1PDB5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G1PDB5
Domain Number 1 Region: 258-481
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.23e-63
Family Nuclear receptor ligand-binding domain 0.0000000017
Further Details:      
 
Domain Number 2 Region: 135-219
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.53e-27
Family Nuclear receptor 0.00005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) G1PDB5
Sequence length 482
Comment (tr|G1PDB5|G1PDB5_MYOLU) Nuclear receptor subfamily 1 group H member 4 {ECO:0000313|Ensembl:ENSMLUP00000008448} KW=Complete proteome; Reference proteome OX=59463 OS=Myotis lucifugus (Little brown bat). GN=NR1H4 OC=Vespertilionidae; Myotis.
Sequence
MVMQFQELENPAQISPCQSCTSSGSVMEMMSMKPAKGVLTEPTTGPLGQNLEVESYSQYN
NIQFPQVQPQISSSSYYSSLGFYPQQPEEWYSPGLYELKPLPTETLYQGETEVAEIPVTK
KPRMGTSAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCV
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLR
QVTSTTKSCREKTELTLDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEM
ATSHVQILVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPAGHADLLEE
RIRKSGISDEYITPMFSFYKSVAELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEP
LLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWD
VQ
Download sequence
Identical sequences G1PDB5
ENSMLUP00000008448 XP_006084155.1.53796 ENSMLUP00000008448

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]