SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G1SB65 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G1SB65
Domain Number 1 Region: 243-310
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000000011
Family Splicing factor U2AF subunits 0.041
Further Details:      
 
Weak hits

Sequence:  G1SB65
Domain Number - Region: 309-337
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000772
Family CCCH zinc finger 0.0048
Further Details:      
 
Domain Number - Region: 174-199
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000916
Family CCCH zinc finger 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) G1SB65
Sequence length 482
Comment (tr|G1SB65|G1SB65_NOMLE) Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 1 {ECO:0000313|Ensembl:ENSNLEP00000022759} KW=Complete proteome; Reference proteome OX=61853 OS=leucogenys). GN=ZRSR1 OC=Catarrhini; Hylobatidae; Nomascus.
Sequence
MAALEKMMFPEKMTFPEKPSHKKYRAALKKEKRKKRRQELARLRDSGLLQKEEEDTFIEE
QQLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKWQEEQERELKEQWKEQQ
RKEREEEEQKQQEKKEKEEAVQKMLDQAENELENGTIWQNPEPPVDFRVMEKDRANCPFY
SKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQ
FLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGR
QLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDTYLSPDQTGS
SFGKNSERREKMGHHDHYYSRQWGRRNPSPDHSCKRNGESERKRSSHRGKKSHKRTSKSR
ERHNSPSRGRNRHRSRDQGSRSQSRRSRRSHRSRSQSSSRCRSHGRRRSGNRDRTVQSPK
SK
Download sequence
Identical sequences G1SB65
ENSNLEP00000022759 ENSNLEP00000022759

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]