SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G3NPD4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G3NPD4
Domain Number 1 Region: 384-737
Classification Level Classification E-value
Superfamily L domain-like 1.26e-53
Family Internalin LRR domain 0.01
Further Details:      
 
Domain Number 2 Region: 799-944
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 1.57e-44
Family Toll/Interleukin receptor TIR domain 0.0000257
Further Details:      
 
Domain Number 3 Region: 52-399
Classification Level Classification E-value
Superfamily L domain-like 1.93e-43
Family Ngr ectodomain-like 0.0085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) G3NPD4
Sequence length 961
Comment (tr|G3NPD4|G3NPD4_GASAC) Uncharacterized protein {ECO:0000313|Ensembl:ENSGACP00000007198} KW=Complete proteome; Reference proteome OX=69293 OS=Gasterosteus aculeatus (Three-spined stickleback). GN= OC=Gasterosteus.
Sequence
MANGVKEDKTMEKRGFACFKLSFVFFMLNVSSSALPVRGFYLKSGRITDFNASCSRLHLQ
AVPRDIPSTVRGFDLSENRITMIQAPDFKNFSALITLDLKRNMISQIDAGAFADLISLKT
LNLNNNRLTAVGDDLFHGLSNLTELRINNNRIKNLSSTSFESLTSLTFLDMSYNRLHLLT
KVHTMLQQLPNLLELSVKSNLITSFHSWDLTNRSLKLTSLDLSLNDITVFKVTADVFPNL
TSLSIGRIHSKRTAMQWDIRGGTFFSRVSTLDISGLKMDEAAMRPLGENFNPSLTSLRMN
AMRGTRLTKLVNVSCSVPTVSRLQMQQNNLHYINAKFFQLCANITEMDLGKNSIANISYE
AFRSLPGLKILNLSQNKLAFITPATGNLPTLEELDLSQNYITTLGCNSFANLTKLKILSL
HQNSIPALRKCVFEGLIKLQVVKLQNNSISKLDGAFSIHLPNLKRLRLNINKLTAIKRGD
FAGLQSLESLALDNNMITTLEHGSFKGLSNLTELQLSTNRIDETTLPERFRDLVNLESLD
LSENRVQFKNAFLTPPPFSGLSRLRTLVFLGNGRRGKFSLPYNLLEGLTNLSFFSARKNQ
LSFLHRDTFNYTPRLQTLDIGANDLRNLSSELFHPIGGLESLYISKISLDSLDFLIDANL
TKLEFIQGKLNQYSVLSEEVIKSMPSLVYLNLQGNSFTCDCDNAYFRSWIVNDKQTQVYE
ADKFLCNYPSELKGKKLLELDVKSCTVNTEFIYFISTTSTILLFMLTSLTYHFMRWQLVY
AYYLFLALLFDTKLKNKQQPKRYDAFVSYNTSDEPWVMRQLLPKLEGEQGWRLCLHHRDF
EPGKPIIDNITDAIYGSRKTICVISRRYLESEWCSTEIQVASFRLFDERKDVLVLVFLED
IPGAELSPYYRMRKLLKRRTYLSWPRAGQHPNLFWEKLRQALGTKDDPGREELVPTLLDR
Q
Download sequence
Identical sequences G3NPD4
69293.ENSGACP00000007198 ENSGACP00000007198 ENSGACP00000007198

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]