SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G3T2U4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G3T2U4
Domain Number 1 Region: 1294-1461
Classification Level Classification E-value
Superfamily C-type lectin-like 8.22e-30
Family C-type lectin domain 0.0015
Further Details:      
 
Domain Number 2 Region: 1023-1135
Classification Level Classification E-value
Superfamily CalX-like 1.7e-21
Family CalX-beta domain 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) G3T2U4
Sequence length 1462
Comment (tr|G3T2U4|G3T2U4_LOXAF) FRAS1 related extracellular matrix 1 {ECO:0000313|Ensembl:ENSLAFP00000007518} KW=Complete proteome; Reference proteome OX=9785 OS=Loxodonta africana (African elephant). GN=FREM1 OC=Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
Sequence
SALQHAVNYMKVAYMPPMQDIGPHPQHVQFTFSISNQHGGILHGICFNITILPVDNQVPE
VFTNPLRVAEGGQCVISTEHILVSDADTKLDNIYLSLQRPPLHGRVELNGLPLNTGSTFS
WEDLHALKIRYQHDGSEVLQDDILLEVTDGTNSAEFVLHIKVFPVNDEPPVLKADLIPMM
HCSEGEEVVITSEYIFATDVDSDDSRLVFMIARKPQHGVVRKAGIITDQFSQGDVISRAV
TYKHTGGEIGLMPCFDTITLVVSDGQAGPFVNGCCYSGAHPSVPLHESFPVYDLNITVHP
VDNQPPSIAIGTMFVVDEGLSASVTINHLSATDPDTAADDLEFVLVSSPQFGYIENTLPS
AGFEKSNMGKSIASFQWKDMKALHVNYVQSKHLRIEPTADQFMVYVTDGKRRSLEIPFHV
IINPTNDEAPDFIVQNITVREGQMRELGSSVINAADLDIPKDSLLFTITHEPRHGLLING
VFSEGLPQYKQPANPDQKHHLVHNFSMELLKTGMRLLYVHDDSESLADDFTIQLSDGKYK
LVKTISVEVTPVNDQKPVLTKKAEIVMNMGETRIISNAVLSATDEDSPREKIYYLFERLP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNMLRYTHTGAVDSQNKDSFTFYLWDGDNRSP
AFECHITIKDIGKGKFIILINKSILYQKDPFGHLSIKVIVYPNRTTKFLFCLYVITSPPQ
YGQLSWSRPLQASDEWHIAVQTVCYILQAKITKVPSWSKVKFLFIVSNGLRTKHGVFEVT
LETVDKALPVVTMNKGLRLIKGATGLLTPDLLQLTDPDTPLEKLTFLLAQLPQHGQLFLR
GTALLHPNFTQQDVDSKNVAYRHSGGDSQIDQFTFTATDRTNQGFVVDGRVWEEPVSFTI
QVDQLDKMAPHITYLRSPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFKISQGPQH
GHLENTTTVGEFIHEKFSQKDLNSKTILYIINPSREVNSDVMEFQIMDPTGNSAPPQILE
LKWSHIEWSQTDYEVCEDVGVFPLEITRTGFLMDSAFVSVKVNPVSATVGKDFTVTPSKL
IQFDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHR
SYHSNQNKHKAREKGIWHPLHRGSSSPTTSGSFHLERKPFVSSMRLAVTRGDSPRGFDST
DLSRMRLRPRGNGRTIHPSSVYRNGTDIIYNYHGTVSLKLEDDSSSTHKRKAKVSVISCP
QKTIKVAELPQADKVESTTDSHFPRQDQLPSFPKNCTLELKGLFYFEESLQKLYQCNGTA
WKAWSPQTKEVEDKPCPAGWHHHSGYCHSLITEQKRTWTAAAQACREEHLGSLVTVLTRQ
HMRWLWDISGRRPFWIGLNDQVHAGYWEWIGGEPVTFTNWRKVTHQHSKPGKNCVLVHRQ
GKWQTKDCRQGKPHSYICSRKL
Download sequence
Identical sequences G3T2U4
ENSLAFP00000007518 ENSLAFP00000007518

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]