SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G3U450 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G3U450
Domain Number 1 Region: 35-124
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.19e-36
Family SCAN domain 0.0000508
Further Details:      
 
Domain Number 2 Region: 441-497
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.23e-22
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 3 Region: 482-534
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.42e-19
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 4 Region: 386-442
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.29e-19
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 5 Region: 347-399
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.05e-18
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 
Domain Number 6 Region: 224-258
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000575
Family KRAB domain (Kruppel-associated box) 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) G3U450
Sequence length 542
Comment (tr|G3U450|G3U450_LOXAF) Zinc finger and SCAN domain containing 25 {ECO:0000313|Ensembl:ENSLAFP00000022608} KW=Complete proteome; Reference proteome OX=9785 OS=Loxodonta africana (African elephant). GN=ZSCAN25 OC=Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
Sequence
MLKERPGMAEEPQLQMSVPVVKLEKELPWGKGREDSSPETFRLRFRQFRYQEAAGPQEAL
RELQELCHQWLRPELHTKEQILELLVLEQFLTILPREFYAWIREHCPESSKALVAMMEDM
TERTLEAKAVPCHVQGEQDETALCRGPWEPGVHLGPVEVKPEWGLPHGEGVAGLGQSTEE
QLNQDPGDGTQTFQEQALPLLQAGPGLPSVNTRDQEMAAGFLTTGSQGLGPFKDMALAFP
EEDWRHVTPAQIDCFGEYVEPEDCGVSSSGIGNKEKEAKTQQEDLKGPLAGLTSERFGEA
VLQSPELGRTCDQEPSSSVGHTSGLPAPQHGVIPQPDDLKTHSAFWKPFQCPECGKGFSR
SSNLVRHQRTHEEEKSYGCVECGKGFTLREYLMKHQRTHLGKRPYVCSECWKTFSQRHHL
EVHQRSHTGEKPYKCTDCWKSFSRRQHLQVHRRTHTGEKPYTCECGKSFSRNANLAVHRR
AHTGEKPYGCQVCGKRFSKGERLVRHQRIHTGEKPYHCSACGRSFNQRSILNRHQKTQHR
QE
Download sequence
Identical sequences G3U450
ENSLAFP00000022608 ENSLAFP00000022608

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]