SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G3WT58 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G3WT58
Domain Number 1 Region: 913-1012,1510-1687
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.99e-37
Family Tandem AAA-ATPase domain 0.0025
Further Details:      
 
Domain Number 2 Region: 723-786,813-896
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.78e-24
Family Tandem AAA-ATPase domain 0.0048
Further Details:      
 
Domain Number 3 Region: 437-519
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0000000000000261
Family Linker histone H1/H5 0.004
Further Details:      
 
Domain Number 4 Region: 259-323,368-398
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000000425
Family Tandem AAA-ATPase domain 0.02
Further Details:      
 
Domain Number 5 Region: 658-724
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000102
Family PHD domain 0.0083
Further Details:      
 
Domain Number 6 Region: 1439-1492
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000115
Family RING finger domain, C3HC4 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) G3WT58
Sequence length 1691
Comment (tr|G3WT58|G3WT58_SARHA) SNF2 histone linker PHD RING helicase {ECO:0000313|Ensembl:ENSSHAP00000018613} KW=Complete proteome; Reference proteome OX=9305 OS=Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius). GN=SHPRH OC=Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus.
Sequence
MSSRRKRAPPVRMDEDKQQQLRWNMHEDRKHEVIILDDDDDEPIPGPSSSSIPLIVLDDE
ESLEEEEEHKTKRRCSKSLSSLTDEEETNCILPSLLIKLNVVISPYHLTNSWKAFLGELT
LQLLGEEVLTESFHERKFTLMTADSSDQLQISVHPMCKEVEDQQKGLEEPVSISEKSILV
ESSLSNEMLEDLRWLQKKKMVELYHRPEGIQTIKVGIYLLEAGLAKPDFLSDGNGRIKKA
NQLIQKLMEKFYNFMIPDILEEDEEESDSELERQNIEELYDFVRHIHQQEAQHLQEDVQH
PALIPVLRPYQSEAVNWMLLRENFKNSPANENTLHFLWREVLTTEGMKFYYNPFTGCIIR
EYPNAGPQWPGGILADEMGLGKTVEVLALILSHTRQDIKQDVLTLPEGKLVNYFIPPQPA
EESKKGKSKMMEFQSKERIQYPSLRVMLLAAVKEMNAKKGASIIAIFKYVSTIYRYDVQR
NRRLLKKSLEKLITERVVEQVKGHGLAGSFKLGKNYKEQPTCFRTKQKATKSPRKSQNKL
SEGKPQSESKDPVSENKGKKSLSLDITENGHDYCEVSRYRGRLRKKSDQHSNEKLQPKAE
ELNATDLQRHCPSSSDRPNTRAAASKSKSDSEEENMKDKVSESEEFFGCEISHANSMSPF
NTSDYRFECICGELGLMDCKARVQCLKCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKP
VSTGATLIISPSSICHQWVDEINRHVRSSSLQVLVYQGVKKHGFLQPHMLAEQDVVITTY
DVLRSELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAA
EMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGIDPYWVKHWWDQLLYRPYCRKNPQPL
YELIAKIMWRSAKKDVIDQIQIPPQTEDIHWLHFSPVERHFYHRQHEVCCQDALAKLRKI
SDWALKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKC
RTECEEAHRQLVCALNGLAGIHIIKDEYAQAVDLYREVLRSSEEHKDKLKTDSLQRLHST
HNLMELLLAKHPGIPPTLRDGKLQEEAEQLRQHYMSKSNAEVAEAHQALQPVLQTIRELQ
RKIHSGSPWWLDVIQSAIQYAIDEELVQRVQNEITSNYKQQTSKLSMAEKFRDCRGLQYL
LTTQMEELKKFQKLVREAVKNLEGPPSRDVIEAATICHLRPVRLPLNNCVFCKADELFTE
YESKLFSHTVKGQTAIFEEMIEDEEGLVDDRLPTTSRGLWATSETERSLKAILSFAKAHR
LDLRLIEEGNTSMELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPDEPKP
NPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPC
PICARQLGKQWAVLTCGHCFCNECVAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFT
AETANQEEDIPVKGSHSTKVEAVVRTLKRIQFKNPGAKSLVFSTWQDVLDIISKALYDNN
MVFAQINGIHRFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHEL
QAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTSSSLKQSEASVLTVADLA
DLFSEETEELE
Download sequence
Identical sequences G3WT58
ENSSHAP00000018613 ENSSHAP00000018613

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]