SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for O61939 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  O61939
Domain Number 1 Region: 179-370
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 5.11e-42
Family Nuclear receptor ligand-binding domain 0.0028
Further Details:      
 
Domain Number 2 Region: 32-120
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.22e-20
Family Nuclear receptor 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) O61939
Sequence length 398
Comment (tr|O61939|O61939_CAEEL) Nuclear Hormone Receptor family {ECO:0000313|EMBL:CCD63572.1} KW=Complete proteome; Reference proteome OX=6239 OS=Caenorhabditis elegans. GN=CELE_T24A6.8 OC=Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Sequence
MEVVYCNTFSNVWMSENNVEIKLISTKILKPSKCMVCVRPAHGYHCDVATCKGCKTFFRR
MCLLRGEIKCSTSGDCYDLEKRNSPLLRCRPCRFKRCLLVGMNPKALIIDGSNILGEKQV
HFNEQQIQGTIDVLSHLEAKTEQFSKCAYNPDWTNIRLKDLILSPSKLSMSDKVGTFPDW
PLCPNYEFPDQIVHRDIQSFSPHRKQWRFSNLMTAVEYTKTFSFFHDLSFQDQINLLKHV
VIGLANFNTTYYTLKNKFDDLRQPDGTQRPGVNEPHYCAHTVPFGPMKRIKIQFNEFLLL
KILFVCNPAVPNLSKHAQFVIEKERHHYSNILLKYCLQNYSYGPTRFVELIEIFGVLHRQ
QKLMNDLYIYVLSPLLLKLPKEFSVPLIEEIVLLYALS
Download sequence
Identical sequences O61939
6239.T24A6.8 NP_503987.1.50509 T24A6.8 T24A6.8 T24A6.8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]